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Correction: Wiedmann, M., et al. Exploration of the Role of the Non-Coding RNA SbrE in L. monocytogenes Stress Response. Int. J. Mol. Sci. 2013, 14, 378-393
- Source :
- International Journal of Molecular Sciences, International Journal of Molecular Sciences, Vol 14, Iss 5, Pp 9685-9685 (2013)
- Publication Year :
- 2013
- Publisher :
- MDPI AG, 2013.
-
Abstract
- SbrE is a ncRNA in Listeria monocytogenes, reported to be up-regulated by the alternative sigma factor σB. Initial quantitative RT-PCR (qRT-PCR) experiments on parent strains and isogenic ΔsigB strains demonstrated σB-dependent expression of SbrE across the four L. monocytogenes lineages and in L. innocua. Microarray and proteomics (MDLC/MS/MS with iTRAQ labeling) experiments with the L. monocytogenes parent strain and an isogenic ΔsbrE strain identified a single gene (lmo0636) and two proteins (Lmo0637 and Lmo2094) that showed lower expression levels in the ΔsbrE strain. qRT-PCR demonstrated an increase in SbrE transcript levels in stationary phase L. monocytogenes and in bacteria exposed to oxidative stress (mean log2 transcript levels 7.68 ± 0.57 and 1.70 ± 0.71 greater than in mid-log phase cells, respectively). However, no significant differences in growth or survival between the parent strain and ΔsbrE strain were confirmed under a variety of environmental stress conditions tested. Our data suggest that σB-dependent transcription of SbrE represents a conserved mechanism that contributes, across Listeria species, to fine-tuning of gene expression under specific environmental conditions that remain to be defined.
- Subjects :
- non-coding RNA
Peptide
Biology
Bioinformatics
Mass Spectrometry
Article
Catalysis
lcsh:Chemistry
Inorganic Chemistry
Fight-or-flight response
Bacterial Proteins
sigma B
Mole
Peptide mass
Physical and Theoretical Chemistry
lcsh:QH301-705.5
Molecular Biology
Spectroscopy
Probability
chemistry.chemical_classification
Organic Chemistry
INT
General Medicine
Non-coding RNA
Listeria monocytogenes
Molecular biology
Confidence interval
Computer Science Applications
Molecular Weight
n/a
lcsh:Biology (General)
lcsh:QD1-999
chemistry
Peptides
L monocytogenes
Subjects
Details
- ISSN :
- 14220067
- Volume :
- 14
- Database :
- OpenAIRE
- Journal :
- International Journal of Molecular Sciences
- Accession number :
- edsair.doi.dedup.....045b521d7046fc854a33b0d2fa26012f
- Full Text :
- https://doi.org/10.3390/ijms14059685