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Approximate entropy of network parameters

Authors :
James West
Andrew E. Teschendorff
Simone Severini
Lucas Lacasa
Source :
Physical Review e, ISSN 1539-3755, 2012, Vol. 85, Archivo Digital UPM, Universidad Politécnica de Madrid
Publication Year :
2011

Abstract

We study the notion of approximate entropy within the framework of network theory. Approximate entropy is an uncertainty measure originally proposed in the context of dynamical systems and time series. We firstly define a purely structural entropy obtained by computing the approximate entropy of the so called slide sequence. This is a surrogate of the degree sequence and it is suggested by the frequency partition of a graph. We examine this quantity for standard scale-free and Erd\H{o}s-R\'enyi networks. By using classical results of Pincus, we show that our entropy measure converges with network size to a certain binary Shannon entropy. On a second step, with specific attention to networks generated by dynamical processes, we investigate approximate entropy of horizontal visibility graphs. Visibility graphs permit to naturally associate to a network the notion of temporal correlations, therefore providing the measure a dynamical garment. We show that approximate entropy distinguishes visibility graphs generated by processes with different complexity. The result probes to a greater extent these networks for the study of dynamical systems. Applications to certain biological data arising in cancer genomics are finally considered in the light of both approaches.<br />Comment: 11 pages, 5 EPS figures

Details

Language :
English
Database :
OpenAIRE
Journal :
Physical Review e, ISSN 1539-3755, 2012, Vol. 85, Archivo Digital UPM, Universidad Politécnica de Madrid
Accession number :
edsair.doi.dedup.....04a0cc52752c8819ad533af062a3d4dc