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Approximate entropy of network parameters
- Source :
- Physical Review e, ISSN 1539-3755, 2012, Vol. 85, Archivo Digital UPM, Universidad Politécnica de Madrid
- Publication Year :
- 2011
-
Abstract
- We study the notion of approximate entropy within the framework of network theory. Approximate entropy is an uncertainty measure originally proposed in the context of dynamical systems and time series. We firstly define a purely structural entropy obtained by computing the approximate entropy of the so called slide sequence. This is a surrogate of the degree sequence and it is suggested by the frequency partition of a graph. We examine this quantity for standard scale-free and Erd\H{o}s-R\'enyi networks. By using classical results of Pincus, we show that our entropy measure converges with network size to a certain binary Shannon entropy. On a second step, with specific attention to networks generated by dynamical processes, we investigate approximate entropy of horizontal visibility graphs. Visibility graphs permit to naturally associate to a network the notion of temporal correlations, therefore providing the measure a dynamical garment. We show that approximate entropy distinguishes visibility graphs generated by processes with different complexity. The result probes to a greater extent these networks for the study of dynamical systems. Applications to certain biological data arising in cancer genomics are finally considered in the light of both approaches.<br />Comment: 11 pages, 5 EPS figures
- Subjects :
- Theoretical computer science
Databases, Factual
Dynamical systems theory
Matemáticas
Entropy
Biophysics
Binary number
FOS: Physical sciences
Breast Neoplasms
Network theory
01 natural sciences
Approximate entropy
03 medical and health sciences
Frequency partition of a graph
0103 physical sciences
Humans
Entropy (information theory)
Poisson Distribution
Statistical physics
Neoplasm Metastasis
010306 general physics
Condensed Matter - Statistical Mechanics
030304 developmental biology
Mathematics
Conditional entropy
0303 health sciences
Statistical Mechanics (cond-mat.stat-mech)
Reproducibility of Results
Genomics
Disordered Systems and Neural Networks (cond-mat.dis-nn)
Condensed Matter - Disordered Systems and Neural Networks
Information diagram
Gene Expression Regulation, Neoplastic
Nonlinear Dynamics
Female
Algorithms
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- Physical Review e, ISSN 1539-3755, 2012, Vol. 85, Archivo Digital UPM, Universidad Politécnica de Madrid
- Accession number :
- edsair.doi.dedup.....04a0cc52752c8819ad533af062a3d4dc