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Metabolomic Signature of Endometrial Cancer
- Source :
- Journal of proteome research. 17(2)
- Publication Year :
- 2017
-
Abstract
- Endometrial cancer (EC) is the most common cancer of the female reproductive tract in developed countries. At the moment, no effective screening system is available. Here, we evaluate the diagnostic performance of a serum metabolomic signature. Two enrollments were carried out, one consisting of 168 subjects: 88 with EC and 80 healthy women, was used for building the classification models. The second (used to establish the performance of the classification algorithm) was consisted of 120 subjects: 30 with EC, 30 with ovarian cancer, 10 with benign endometrial disease, and 50 healthy controls. Two ensemble models were built, one with all EC versus controls (Model I) and one in which EC patients were aggregated according to their histotype (Model II). Serum metabolomic analysis was conducted via gas chromatography-mass spectrometry, while classification was done by an ensemble learning machine. Accuracy ranged from 62% to 99% for the Model I and from 67% to 100% for the Model II. Ensemble model showed an accuracy of 100% both for Model I and II. The most important metabolites in class separation were lactic acid, progesterone, homocysteine, 3-hydroxybutyrate, linoleic acid, stearic acid, myristic acid, threonine, and valine. The serum metabolomics signature of endometrial cancer patients is peculiar because it differs from that of healthy controls and from that of benign endometrial disease and from other gynecological cancers (such as ovarian cancer).
- Subjects :
- 0301 basic medicine
Oncology
Threonine
Biochemistry
Myristic Acid
Machine Learning
Endometrium
0302 clinical medicine
ensemble machine learning model
Prospective Studies
Homocysteine
Progesterone
ensemble machine learning models
3-Hydroxybutyric Acid
Chemistry (all)
Valine
Middle Aged
partial least square discriminant analysis
030220 oncology & carcinogenesis
endometrial cancer
Metabolome
Female
Female Reproductive Tract
Stearic Acids
metabolomic
medicine.medical_specialty
Endometriosis
Gas Chromatography-Mass Spectrometry
Diagnosis, Differential
Linoleic Acid
03 medical and health sciences
Metabolomics
Internal medicine
classification models
medicine
Biomarkers, Tumor
Humans
Lactic Acid
Aged
classification model
business.industry
Endometrial cancer
Cancer
General Chemistry
medicine.disease
Ensemble learning
metabolomics
Endometrial Neoplasms
030104 developmental biology
Case-Control Studies
partial least square discriminant analysi
Ovarian cancer
business
Subjects
Details
- ISSN :
- 15353907
- Volume :
- 17
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Journal of proteome research
- Accession number :
- edsair.doi.dedup.....04e2687720b5ef0c3e62950de449f4e0