Back to Search
Start Over
Application ofCOIbarcode sequence for the identification of snake medicine (Zaocys)
- Source :
- Mitochondrial DNA. 27:483-489
- Publication Year :
- 2014
- Publisher :
- Informa UK Limited, 2014.
-
Abstract
- Counterfeits in the medicine market make the authentication of snakes used for Chinese medicine a challenge to Chinese drug regulatory control agencies. This paper explores existing methods that can be used to quickly and accurately distinguish Zaocys (Z. dhumnades) from its counterfeits for routine identification of snake meats in food and drug control laboratories. In this research, the Cytochrome Oxidase I (COI) fragments of 51 samples from 17 species of snakes were amplified using Polymerase Chain Reaction (PCR) and sequenced. The inter- and intra-specific variations of COI sequences were analyzed and compared based on Kimura-2-parameter (K-2P) distances; the minimal interspecific K-2P distance was 0.0934, which was bigger than the maximum intraspecific K-2P distance in Z. dhumnades (0.0523), indicating that Zaocys can be separated from its counterfeits. The Neighbor-Joining (N-J) tree of the snakes was constructed and the results show that snakes of the same species cluster with 100% bootstrap values. Since the Zaocys and its counterfeits are of different species, they can be distinguished using the N-J tree method. Another 10 samples of Zaocys from markets and drug stores were identified at the species level, among which 5 samples were proven to be the counterfeits--Ptyas korros.
- Subjects :
- 0301 basic medicine
Chinese drug
Snakes
Traditional Chinese medicine
Biology
Barcode
Bioinformatics
Data science
DNA barcoding
Authentication (law)
law.invention
Electron Transport Complex IV
03 medical and health sciences
030104 developmental biology
Regulatory control
Species Specificity
law
Genetics
Animals
DNA Barcoding, Taxonomic
Identification (biology)
Medicine, Chinese Traditional
Molecular Biology
Phylogeny
Sequence (medicine)
Subjects
Details
- ISSN :
- 19401744 and 19401736
- Volume :
- 27
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA
- Accession number :
- edsair.doi.dedup.....04f1554a4ea882d389f06eb00e971fdd