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Identification of a novel immune prognostic model in gastric cancer
- Source :
- Clinical and Translational Oncology. 23:846-855
- Publication Year :
- 2020
- Publisher :
- Springer Science and Business Media LLC, 2020.
-
Abstract
- The tumor immune microenvironment (TIME) is now considered as an important factor during gastric cancer (GC) development. This study identified a novel immune-related risk model for predicting prognosis and assessing the immune status of GC patients. Transcriptomic data were obtained from the TCGA database. The differential expressed immune-related genes (IRGs) were identified through the ImmPort portal. Enrichment analysis was performed to explore the potential molecular mechanism of these IRGs. By the Cox regression analysis, we constructed the immune prognostic model. Then, the association between the model and the immune microenvironment was estimated. The model was validated in the GSE84433 dataset. Totally, we identified 222 differentially expressed IRGs. These IRGs were closely correlated with immune response and immune signaling pathways. Through the Cox regression analysis, we developed the immune prognostic model based on the expression of seven IRGs (CXCL3, NOX4, PROC, FAM19A4, RNASE2, IGHD2-15, CGB5). Patients were stratified into two groups according to immune-related risk scores. Survival analysis indicated that the prognosis of high-risk patients was poorer than low-risk patients. Moreover, the immune-related risk score was an independent prognostic biomarker. More importantly, we found that the infiltration level of immunosuppressive cells and the expression of inhibitory immune checkpoints were higher in high-risk patients. The immune microenvironment tended to be a suppressive status in patients with high-risk scores. This study demonstrated that our model had predictive value for prognosis and the TIME in GC. It might be a robust tool to improve personalized patient management.
- Subjects :
- 0301 basic medicine
Oncology
Cancer Research
medicine.medical_specialty
animal diseases
Gene Expression
chemical and pharmacologic phenomena
Eosinophil-Derived Neurotoxin
Transcriptome
03 medical and health sciences
0302 clinical medicine
Immune system
Risk Factors
Stomach Neoplasms
Internal medicine
Databases, Genetic
Immune Tolerance
Tumor Microenvironment
medicine
Humans
Dwarfism, Pituitary
IRGs
Survival analysis
Framingham Risk Score
Proportional hazards model
business.industry
Immunity
Models, Immunological
General Medicine
biochemical phenomena, metabolism, and nutrition
Immune Checkpoint Proteins
Prognosis
Survival Analysis
030104 developmental biology
CXCL3
NADPH Oxidase 4
030220 oncology & carcinogenesis
Disease Progression
Neoplastic Stem Cells
Prognostic model
Cytokines
Regression Analysis
bacteria
business
Chemokines, CXC
Subjects
Details
- ISSN :
- 16993055 and 1699048X
- Volume :
- 23
- Database :
- OpenAIRE
- Journal :
- Clinical and Translational Oncology
- Accession number :
- edsair.doi.dedup.....05f2d444ba0107710a971a7385e96a99
- Full Text :
- https://doi.org/10.1007/s12094-020-02478-5