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Flavobacterium cauense sp. nov., isolated from sediment of a eutrophic lake
- Source :
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 59:2666-2669
- Publication Year :
- 2009
- Publisher :
- Microbiology Society, 2009.
-
Abstract
- A Gram-negative, rod-shaped, yellow-pigmented bacterium, designated strain R2A-7(T), was isolated from sediment of the eutrophic Taihu Lake in Jiangsu Province, China. The isolate was subjected to a taxonomic study using a polyphasic approach. Phylogenetic analysis based on the 16S rRNA gene sequences placed strain R2A-7(T) within the genus Flavobacterium in the family Flavobacteriaceae. The highest sequence similarity was found with Flavobacterium saliperosum (98.3 %), followed by other Flavobacterium species with similarities96.0 %. The major fatty acids (5 %) were 15 : 0 iso, 17 : 1 iso omega9c, 17 : 0 iso 3-OH, 15 : 1 iso G and 15 : 0 iso 3-OH. The G+C content of the genomic DNA of strain R2A-7(T) was 37.7 mol%. The DNA-DNA relatedness value with F. saliperosum CGMCC 1.3801(T) was 40.6 %. Molecular and phenotypic data suggest that strain R2A-7(T) represents a novel species within the genus Flavobacterium, for which the name Flavobacterium cauense is proposed. The type strain is R2A-7(T) (=CGMCC 1.7270(T)=NBRC 104929(T)).
- Subjects :
- DNA, Bacterial
Geologic Sediments
Phylogenetic tree
biology
Fatty Acids
Molecular Sequence Data
Fresh Water
General Medicine
Eutrophication
16S ribosomal RNA
biology.organism_classification
DNA, Ribosomal
Flavobacterium
Microbiology
Flavobacteriaceae
genomic DNA
RNA, Ribosomal, 16S
Botany
Taxonomy (biology)
Phylogeny
Ecology, Evolution, Behavior and Systematics
Bacteria
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 59
- Database :
- OpenAIRE
- Journal :
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Accession number :
- edsair.doi.dedup.....05f9437628cbdd837fb62d2fe816c074
- Full Text :
- https://doi.org/10.1099/ijs.0.009688-0