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Molecular epidemiology of hepatitis B virus in Misiones, Argentina
- Source :
- Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 44
- Publication Year :
- 2015
-
Abstract
- Hepatitis B virus (HBV) infection is a major public health problem worldwide. The aims of this study were to describe the molecular epidemiology of HBV in the Province of Misiones, Argentina and estimate the phylodynamic of the main groups in a Bayesian coalescent framework. To this end, partial or complete genome sequences were obtained from 52 blood donor candidates. The phylogenetic analysis based on partial sequences of S/P region showed a predominance of genotype D (65.4%), followed by genotype F (30.8%) and genotype A as a minority (3.8%). At subgenotype level, the circulation of subgenotypes D3 (42.3%), D2 (13.5%), F1b (11.5%) and F4 (9.6%) was mainly identified. The Bayesian coalescent analysis of 29 complete genome sequences for the main groups revealed that the subgenotypes D2 and D3 had several introductions to the region, with ancestors dating back from 1921 to 1969 and diversification events until the late '70s. The genotype F in Misiones has a more recent history; subgenotype F4 isolates were intermixed with sequences from Argentina and neighboring countries and only one significant cluster dated back in 1994 was observed. Subgenotype F1b isolates exhibited low genetic distance and formed a closely related monophyletic cluster, suggesting a very recent introduction. In conclusion, the phylogenetic and coalescent analyses showed that the European genotype D has a higher circulation, a longer history of diversification and may be responsible for the largest proportion of chronic HBV infections in the Province of Misiones. Genotype F, especially subgenotype F1b, had a more recent introduction and its diversification in the last 20years might be related to its involvement in new transmission events.
- Subjects :
- 0301 basic medicine
Microbiology (medical)
Hepatitis B virus
Genotype
030106 microbiology
Argentina
Biology
medicine.disease_cause
Microbiology
Coalescent theory
03 medical and health sciences
Phylogenetics
Genetics
medicine
Humans
Promoter Regions, Genetic
Molecular Biology
Ecology, Evolution, Behavior and Systematics
Phylogeny
Molecular Epidemiology
Molecular epidemiology
Phylogenetic tree
Genetic Variation
Bayes Theorem
Hepatitis B
medicine.disease
Virology
030104 developmental biology
Infectious Diseases
Genetic distance
Mutation
Subjects
Details
- ISSN :
- 15677257
- Volume :
- 44
- Database :
- OpenAIRE
- Journal :
- Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
- Accession number :
- edsair.doi.dedup.....083aba9d284e698637882045a9fc23ba