Additional file 1 of Characterization of the REVEILLE family in Rosaceae and role of PbLHY in flowering time regulation

Additional file 1: Fig. S1. (a) Coding sequence of PbLHY. (b) Alignment of PbLHY and AtCCA1/AtLHY protein sequences. The red box indicates the MYB domain. The blue backgrounds correspond to the percent identity of the multiple alignment. Fig. S2. Alignment of conserved domains from PbRVE proteins. (a) Alignment of MYB domains from ten PbRVEs and eleven AtRVEs. Red box indicates MYB domain, and blue box indicates SHAQK(Y/F) F sequence. (b) Alignment of LCL domains from subfamily II members. The red box indicates the MYB domain. The green box indicates the LCL domain. The blue backgrounds correspond to the percent identity of the multiple alignment. Fig. S3. The motif details of ten conserved domains identified in RVE proteins and the logos of these domains created using the MEME. Amino acids are expressed in the standard single letter code. The size of the letters at each position represents their frequency.