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Accurate Random Coil Chemical Shifts from an Analysis of Loop Regions in Native States of Proteins

Authors :
Alfonso De Simone
Andrea Cavalli
Michele Vendruscolo
Wim F. Vranken
Shang-Te Danny Hsu
De Simone, A.
Cavalli, A.
Hsu, S. -T. D.
Vranken, W.
Vendruscolo, M.
Source :
Journal of the American Chemical Society. 131:16332-16333
Publication Year :
2009
Publisher :
American Chemical Society (ACS), 2009.

Abstract

(Figure Presented) We present a method for calculating accurate random coil chemical shift values of proteins. These values are obtained by analyzing the relationship between the amino acid sequences in flexible loop regions of native states and the corresponding experimentally measured chemical shifts. We estimate the errors in the random coil chemical shift scales to be 0.31 ppm for 13Cα, 0.37 ppm for 13Cβ, 0.31 ppm for 13CO, 0.68 ppm for 15N, 0.09 ppm for 1H, and 0.04 ppm for 1Hα. © 2009 American Chemical Society.

Details

ISSN :
15205126 and 00027863
Volume :
131
Database :
OpenAIRE
Journal :
Journal of the American Chemical Society
Accession number :
edsair.doi.dedup.....0a7caee259a7343d8594ba260fc8a22d
Full Text :
https://doi.org/10.1021/ja904937a