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Solution NMR structure of CHU_1110 from Cytophaga hutchinsonii , an AHSA1 protein potentially involved in metal ion stress response

Authors :
Maili Liu
Chunjie Liang
Theresa Ramelot
Ting He
Xuegang Li
Michael A. Kennedy
Xiali Yue
Yunhuang Yang
Jiang Zhu
Source :
Proteins: Structure, Function, and Bioinformatics. 87:91-95
Publication Year :
2018
Publisher :
Wiley, 2018.

Abstract

We report the solution nuclear magnetic resonance (NMR) structure of CHU_1110 from Cytophaga hutchinsonii. CHU_1110 contains three α-helices and one antiparallel β-sheet, forming a large cavity in the center of the protein, which are consistent with the structural characteristics of AHSA1 protein family. This protein shows high structural similarities to the prokaryotic proteins RHE_CH02687 from Rhizobium etli and YndB from Bacillus subtilis, which can bind with flavinoids. Unlike these two homologs, CHU_1110 shows no obvious interaction with flavonoids in NMR titration experiments. In addition, no direct interaction has been observed between CHU_1110 and ATP, although many homologous sequences of CHU_1110 have been annotated as ATPase. Combining the analysis of structural similarity of CHU_1110 and genomic context of its encoding gene, we speculate that CHU_1110 may be involved in the stress response of bacteria to heavy metal ions, even though its specific biological functions that need to be further investigated.

Details

ISSN :
08873585
Volume :
87
Database :
OpenAIRE
Journal :
Proteins: Structure, Function, and Bioinformatics
Accession number :
edsair.doi.dedup.....0ac786124fa9023786011893717cb5e4