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Next-generation sequencing of 34 genes in sudden unexplained death victims in forensics and in patients with channelopathic cardiac diseases
- Source :
- International journal of legal medicine. 129(4)
- Publication Year :
- 2014
-
Abstract
- Sudden cardiac death (SCD) is responsible for a large proportion of sudden deaths in young individuals. In forensic medicine, many cases remain unexplained after routine postmortem autopsy and conventional investigations. These cases are called sudden unexplained deaths (SUD). Genetic testing has been suggested useful in forensic medicine, although in general with a significantly lower success rate compared to the clinical setting. The purpose of the study was to estimate the frequency of pathogenic variants in the genes most frequently associated with SCD in SUD cases and compare the frequency to that in patients with inherited cardiac channelopathies. Fifteen forensic SUD cases and 29 patients with channelopathies were investigated. DNA from 34 of the genes most frequently associated with SCD were captured using NimbleGen SeqCap EZ library build and were sequenced with next-generation sequencing (NGS) on an Illumina MiSeq. Likely pathogenic variants were identified in three out of 15 (20 %) forensic SUD cases compared to 12 out of 29 (41 %) patients with channelopathies. The difference was not statistically significant (p = 0.1). Additionally, two larger deletions of entire exons were identified in two of the patients (7 %). The frequency of likely pathogenic variants was >2-fold higher in the clinical setting as compared to SUD cases. However, the demonstration of likely pathogenic variants in three out of 15 forensic SUD cases indicates that NGS investigations will contribute to the clinical investigations. Hence, this has the potential to increase the diagnostic rate significantly in the forensic as well as in the clinical setting.
- Subjects :
- Adult
Forensic Genetics
Male
medicine.medical_specialty
Pathology
Adolescent
Autopsy
Polymorphism, Single Nucleotide
DNA sequencing
Pathology and Forensic Medicine
Sudden cardiac death
Young Adult
INDEL Mutation
Internal medicine
medicine
Humans
In patient
Child
Gene
Genetic testing
medicine.diagnostic_test
business.industry
High-Throughput Nucleotide Sequencing
Infant
Sudden unexplained death
Sequence Analysis, DNA
Middle Aged
medicine.disease
Forensic science
Death, Sudden, Cardiac
Child, Preschool
Channelopathies
Female
business
Subjects
Details
- ISSN :
- 14371596
- Volume :
- 129
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- International journal of legal medicine
- Accession number :
- edsair.doi.dedup.....123b7dc372182cff44a166060535ed35