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RCSB Protein Data Bank: A Resource for Chemical, Biochemical, and Structural Explorations of Large and Small Biomolecules
- Source :
- Journal of Chemical Education. 93:569-575
- Publication Year :
- 2016
- Publisher :
- American Chemical Society (ACS), 2016.
-
Abstract
- The Research Collaboratory for Structural Bioinformatics (RCSB) Protein Data Bank (PDB) supports scientific research and education worldwide by providing access to annotated information about three-dimensional (3D) structures of macromolecules (e.g., nucleic acids, proteins), and associated small molecules (e.g., drugs, cofactors, inhibitors) in the PDB archive. Researchers, educators, and students use RCSB PDB resources to study the shape and interactions of biological molecules and their implications in molecular biology, medicine, biotechnology, and beyond. RCSB PDB supports development of standards for data deposition, representation, annotation, and validation of atomic structural data obtained from various experimental methods. Uniform representation of PDB data is essential for providing consistent search and analysis capabilities for all PDB users, from beginning students to domain experts. The RCSB PDB Web site provides tools for searching, visualizing, and analyzing PDB data, including easy exploration of chemical interactions that stabilize macromolecules and play important roles in their interactions and functions. In addition, educational resources are available for free and unrestricted use in the classroom for exploring chemistry and biology at the molecular level.
- Subjects :
- Universities and colleges--Graduate work
0301 basic medicine
First-year college students
Computer science
information science
Protein Data Bank (RCSB PDB)
Multidisciplinary studies
Computational biology
Web-based instruction
Biochemistry
Uniform representation
Education
03 medical and health sciences
Structural bioinformatics
Resource (project management)
Nucleic Acids
natural sciences
X-ray crystallography
Web site
Chemistry--Study and teaching (Secondary)
05 social sciences
Proteins
050301 education
DNA
General Chemistry
computer.file_format
Collaboratory
Protein Data Bank
030104 developmental biology
General public
health occupations
RNA
Interdisciplinary approach in education
Experimental methods
Peptides
0503 education
computer
Subjects
Details
- ISSN :
- 19381328 and 00219584
- Volume :
- 93
- Database :
- OpenAIRE
- Journal :
- Journal of Chemical Education
- Accession number :
- edsair.doi.dedup.....169213ddc2f757e1733480fa6308de96
- Full Text :
- https://doi.org/10.1021/acs.jchemed.5b00404