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Acremotins A–D, peptaibiotics produced by the soil-derived fungus Acremonium persicinum SC0105
- Source :
- The Journal of Antibiotics. 71:927-938
- Publication Year :
- 2018
- Publisher :
- Springer Science and Business Media LLC, 2018.
-
Abstract
- Four new peptaibiotics, acremotins A–D (1–4) featuring three α,α-dialkylated amino acid–imino acid motifs and an unreduced C-terminal residue, along with the known peptaibiotic XR586 (5) were isolated from the solid cultures of the soil-derived fungus Acremonium persicinum SC0105. Their primary structures were characterized by detailed analysis of the HRESIMS/MS fragmentation pattern combined with comprehensive interpretation of the 1D and 2D NMR spectroscopic data. The absolute configurations of amino acid residues were determined by the advanced Marfey’s method. Sequence alignment result shows that 1–4 are closely related to zervamicin IIB and emerimicin IIA, thus belong to peptaibiotic subfamily-3 (SF3). The three-dimensional (3D) structure of 4 was established by theoretical conformational analysis using the ab initio density functional theory (DFT) method, which, together with the CD spectrum, indicated an amphiphilic and helical structure for 4. 1–5 actively inhibited the growth of gram-positive bacterial pathogens, and amongst them 4 was the most potent compound showing MIC of 12.5 and 6.25 µg/ml against S. aureu and MRSA strains, respectively. 1–5 were also cytotoxic against three human cancer cell lines with IC50 ranging from 1.2 to 21.6 μM.
- Subjects :
- Models, Molecular
Pharmacology
Protein Conformation
010405 organic chemistry
Stereochemistry
Chemistry
Ab initio
Sequence alignment
01 natural sciences
0104 chemical sciences
Acremonium
010404 medicinal & biomolecular chemistry
Residue (chemistry)
Protein structure
Drug Discovery
Amphiphile
Density functional theory
Amino Acid Sequence
Peptides
Two-dimensional nuclear magnetic resonance spectroscopy
Peptide sequence
Subjects
Details
- ISSN :
- 18811469 and 00218820
- Volume :
- 71
- Database :
- OpenAIRE
- Journal :
- The Journal of Antibiotics
- Accession number :
- edsair.doi.dedup.....180adc37007323099be79a098fce0c85