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Figure S2 from A Multianalyte Panel Consisting of Extracellular Vesicle miRNAs and mRNAs, cfDNA, and CA19-9 Shows Utility for Diagnosis and Staging of Pancreatic Ductal Adenocarcinoma

Authors :
Erica L. Carpenter
David Issadore
Ben Z. Stanger
Bryson W. Katona
Charles M. Vollmer
Mark H. O'Hara
Andrew Adallah
Daniel Herman
Neha Bhagwat
Hanfei Shen
Andrew Lin
Kyle Tien
Taylor A. Black
Stephanie S. Yee
Theresa Christensen
Jacob E. Till
Jina Ko
Michael J. LaRiviere
Zijian Yang
Publication Year :
2023
Publisher :
American Association for Cancer Research (AACR), 2023.

Abstract

Figure S2. miRNA sequencing to discover miRNA biomarkers to discern PDAC from non-cancer. (A) Raw miRNA sequencing data from 6 healthy controls, 6 non-cancer disease controls, 5 M0 PDAC patients, and 12 M1 PDAC patients. (B) 8 potential miRNA candidates were selected using least absolute shrinkage and selection operator (LASSO) for cancer versus non-cancer, achieving AUC=1 within discovery cohort. (C) We selected 5 out of 8 miRNA candidates based on their abundance as detected by qPCR (Cq < 40) and show the average fold changes of these 5 miRNAs between patient groups. (D) We validated these miRNAs by calculating the correlation coefficient between their qPCR data and the miRNA sequencing data. The overall R2 = 0.6

Details

Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....1a6662ad12f2f4354dbf78e900ab82fd