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Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands

Authors :
Helge Bruelheide
Sophie Dietz
Johannes Sikorski
Michael W. Friedrich
Marion Schrumpf
Katharina Herz
Jörg Overmann
Selma Vieira
Dierk Scheel
Source :
The ISME Journal
Publication Year :
2019
Publisher :
Nature Publishing Group UK, 2019.

Abstract

The active bacterial rhizobiomes and root exudate profiles of phytometers of six plant species growing in central European temperate grassland communities were investigated in three regions located up to 700 km apart, across diverse edaphic conditions and along a strong land use gradient. The recruitment process from bulk soil communities was identified as the major direct driver of the composition of active rhizosphere bacterial communities. Unexpectedly, the effect of soil properties, particularly soil texture, water content, and soil type, strongly dominated over plant properties and the composition of polar root exudates of the primary metabolism. While plant species-specific selection of bacteria was minor, the RNA-based composition of active rhizosphere bacteria substantially differed between rhizosphere and bulk soil. Although other variables could additionally be responsible for the consistent enrichment of particular bacteria in the rhizosphere, distinct bacterial OTUs were linked to the presence of specific polar root exudates independent of individual plant species. Our study also identified numerous previously unknown taxa that are correlated with rhizosphere dynamics and hence represent suitable targets for future manipulations of the plant rhizobiome.

Details

Language :
English
ISSN :
17517370 and 17517362
Volume :
14
Issue :
2
Database :
OpenAIRE
Journal :
The ISME Journal
Accession number :
edsair.doi.dedup.....1b6699b7b1110d9b1f57af53fdc18dfe