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Crystallization and preliminary X-ray diffraction analysis of the seed lectin from Parkia platycephala
- Source :
- Acta crystallographica. Section D, Biological crystallography. 58(Pt 1)
- Publication Year :
- 2001
-
Abstract
- The crystallization and preliminary X-ray diffraction analysis of the seed lectin of Parkia platycephala, a Mimosoideae, regarded as the most primitive group of the Leguminosae plants, are reported. Its amino-acid sequence consists of three tandemly arranged jacalin-related beta-prism domains, which is a novel fold for a leguminous lectin. Furthermore, no other lectin structure with this arrangement of domains has been described. P2(1)2(1)2(1) crystals (unit-cell parameters a = 63.6, b = 68.5, c = 208.5 A), which diffract to a maximum resolution of 2.2 A, were obtained in hanging drops at pH 8 and 293 K by the vapor-diffusion method using 10% 2-propanol and 20% polyethylene glycol 4000 as precipitants. The asymmetric unit contains two lectin molecules and has a solvent content of 46%. Only a single beta-prism domain could be located by molecular replacement using the structure of the Helianthus tuberosus lectin (PDB code 1c3k) as the search model. Isomorphous heavy-atom derivatives are currently being produced to solve the complete structure of the P. platycephala seed lectin.
- Subjects :
- Protein Conformation
Protein Data Bank (RCSB PDB)
Polyethylene glycol
Biology
Crystallography, X-Ray
law.invention
chemistry.chemical_compound
Structural Biology
law
Lectins
Molecular replacement
Crystallization
Resolution (electron density)
food and beverages
Lectin
Fabaceae
General Medicine
biology.organism_classification
Crystallography
chemistry
X-ray crystallography
Seeds
biology.protein
Mimosoideae
Plant Lectins
Subjects
Details
- ISSN :
- 09074449
- Volume :
- 58
- Issue :
- Pt 1
- Database :
- OpenAIRE
- Journal :
- Acta crystallographica. Section D, Biological crystallography
- Accession number :
- edsair.doi.dedup.....1bb1427c61cb089637c2311a080cd8e6