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Combining rapid antigen testing and syndromic surveillance improves community-based COVID-19 detection in a low-income country

Authors :
Fergus J. Chadwick
Jessica Clark
Shayan Chowdhury
Tasnuva Chowdhury
David J. Pascall
Yacob Haddou
Joanna Andrecka
Mikolaj Kundegorski
Craig Wilkie
Eric Brum
Tahmina Shirin
A. S. M. Alamgir
Mahbubur Rahman
Ahmed Nawsher Alam
Farzana Khan
Ben Swallow
Frances S. Mair
Janine Illian
Caroline L. Trotter
Davina L. Hill
Dirk Husmeier
Jason Matthiopoulos
Katie Hampson
Ayesha Sania
Chadwick, Fergus J [0000-0001-8650-1938]
Clark, Jessica [0000-0003-1692-899X]
Chowdhury, Shayan [0000-0001-5153-9055]
Chowdhury, Tasnuva [0000-0003-0660-9784]
Pascall, David J [0000-0002-7543-0860]
Kundegorski, Mikolaj [0000-0002-0982-9371]
Wilkie, Craig [0000-0003-0805-0195]
Brum, Eric [0000-0002-0244-7178]
Rahman, Mahbubur [0000-0001-8577-8281]
Alam, Ahmed Nawsher [0000-0002-7962-0725]
Swallow, Ben [0000-0002-0227-2160]
Illian, Janine [0000-0002-6130-2796]
Trotter, Caroline L [0000-0003-4000-2708]
Hill, Davina L [0000-0001-9085-6192]
Husmeier, Dirk [0000-0003-1673-7413]
Matthiopoulos, Jason [0000-0003-3639-8172]
Hampson, Katie [0000-0001-5392-6884]
Apollo - University of Cambridge Repository
Pascall, David [0000-0002-7543-0860]
Trotter, Caroline [0000-0003-4000-2708]
University of St Andrews. School of Mathematics and Statistics
Publication Year :
2022
Publisher :
Nature Research, 2022.

Abstract

Funder: Juniper Consortium MR/V038613/1<br />Funder: Bill and Melinda Gates Foundation (Bill & Melinda Gates Foundation)<br />Diagnostics for COVID-19 detection are limited in many settings. Syndromic surveillance is often the only means to identify cases but lacks specificity. Rapid antigen testing is inexpensive and easy-to-deploy but can lack sensitivity. We examine how combining these approaches can improve surveillance for guiding interventions in low-income communities in Dhaka, Bangladesh. Rapid-antigen-testing with PCR validation was performed on 1172 symptomatically-identified individuals in their homes. Statistical models were fitted to predict PCR-status using rapid-antigen-test results, syndromic data, and their combination. Under contrasting epidemiological scenarios, the models' predictive and classification performance was evaluated. Models combining rapid-antigen-testing and syndromic data yielded equal-to-better performance to rapid-antigen-test-only models across all scenarios with their best performance in the epidemic growth scenario. These results show that drawing on complementary strengths across rapid diagnostics, improves COVID-19 detection, and reduces false-positive and -negative diagnoses to match local requirements; improvements achievable without additional expense, or changes for patients or practitioners.

Details

Language :
English
ISSN :
20411723
Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....1dad519bbf815e614f33a7e3b3b40303