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Exome Sequencing Can Improve Diagnosis and Alter Patient Management

Authors :
Kiran V. Garimella
Lobna Mansour
Gaia Novarino
Matloob Azam
Figen Celep
Vineet Bafna
Sawsan Abdel-Hadi
Naima Marzouki
Jennifer L. Silhavy
Nouriya A. Al-Saana
Maha S. Zaki
Carrie Sougnez
Joseph G. Gleeson
F. Müjgan Sönmez
Jesus Olvera
Adrienne Collazo
Carsten Russ
Tawfeg Ben-Omran
Stacey Gabriel
Kiley J. Hill
Nitin Udpa
Jana Schroth
Naiara Akizu
Stephanie L. Bielas
Ashleigh E. Schaffer
Tracy Dixon-Salazar
Ali G. Fenstermaker
Laila Selim
Ghada M. H. Abdel-Salam
Source :
Science Translational Medicine, 4, 138, pp. 138ra78-138ra78, Science Translational Medicine, 4, 138ra78-138ra78
Publication Year :
2012
Publisher :
American Association for the Advancement of Science (AAAS), 2012.

Abstract

Item does not contain fulltext The translation of "next-generation" sequencing directly to the clinic is still being assessed but has the potential for genetic diseases to reduce costs, advance accuracy, and point to unsuspected yet treatable conditions. To study its capability in the clinic, we performed whole-exome sequencing in 118 probands with a diagnosis of a pediatric-onset neurodevelopmental disease in which most known causes had been excluded. Twenty-two genes not previously identified as disease-causing were identified in this study (19% of cohort), further establishing exome sequencing as a useful tool for gene discovery. New genes identified included EXOC8 in Joubert syndrome and GFM2 in a patient with microcephaly, simplified gyral pattern, and insulin-dependent diabetes. Exome sequencing uncovered 10 probands (8% of cohort) with mutations in genes known to cause a disease different from the initial diagnosis. Upon further medical evaluation, these mutations were found to account for each proband's disease, leading to a change in diagnosis, some of which led to changes in patient management. Our data provide proof of principle that genomic strategies are useful in clarifying diagnosis in a proportion of patients with neurodevelopmental disorders.

Details

ISSN :
19466242 and 19466234
Volume :
4
Database :
OpenAIRE
Journal :
Science Translational Medicine
Accession number :
edsair.doi.dedup.....2039f5a871bf1bca3ae16aaf79399f2c
Full Text :
https://doi.org/10.1126/scitranslmed.3003544