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Arthrobacter deserti sp. nov., isolated from a desert soil sample
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 66:2035-2040
- Publication Year :
- 2016
- Publisher :
- Microbiology Society, 2016.
-
Abstract
- A Gram-stain-positive, non-motile, rod-shaped, catalase-positive and oxidase-negative bacterium, designated YIM CS25T, was isolated from a soil sample collected from Turpan desert in Xinjiang Uyghur Autonomous Region, north-western China. The isolate grew at 15-40 °C, at pH 6.0-8.0 and with 0-6 % (w/v) NaCl. The phylogenetic trees based on 16S rRNA gene sequences revealed that strain YIM CS25T belonged to the genus Arthrobacter and was closely related to Arthrobacter halodurans JSM 078085T (95.89 % similarity). The peptidoglycan type contained lysine, alanine and glutamic acid. The major whole-cell sugars were galactose, glucose and ribose. The isolate contained diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol as the major polar lipids and MK-9 (H2) as the predominant menaquinone. The major cellular fatty acids were anteiso-C15 : 0, iso-C15 : 0, anteiso-C17 : 0, iso-C16 : 0 and anteiso-C17 : 1ω9c. The genomic DNA G+C content was 68.3 mol%. On the basis of phylogenetic, phenotypic and chemotaxonomic analysis, strain YIM CS25T is considered to represent a novel species of the genus Arthrobacter, for which the name Arthrobacter deserti sp. nov. is proposed. The type strain is YIM CS25T ( = KCTC 39544T = CGMCC 1.15091T).
- Subjects :
- DNA, Bacterial
0301 basic medicine
China
Arthrobacter halodurans
Peptidoglycan
Microbiology
03 medical and health sciences
chemistry.chemical_compound
Cell Wall
RNA, Ribosomal, 16S
Botany
Arthrobacter
Arthrobacter deserti
Phospholipids
Phylogeny
Soil Microbiology
Ecology, Evolution, Behavior and Systematics
Base Composition
biology
Strain (chemistry)
Phylogenetic tree
Fatty Acids
Nucleic Acid Hybridization
Vitamin K 2
Sequence Analysis, DNA
General Medicine
16S ribosomal RNA
biology.organism_classification
Bacterial Typing Techniques
030104 developmental biology
chemistry
Galactose
Desert Climate
Bacteria
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 66
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....2194baa5317a74b3b6268622a1348e5d
- Full Text :
- https://doi.org/10.1099/ijsem.0.000986