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Complete mitochondrial genome ofPtychobarbus kaznakovi(Teleostei: Cypriniformes: Cyprinidae), and repetitive sequences in the D-loop
- Source :
- Mitochondrial DNA. :1-2
- Publication Year :
- 2014
- Publisher :
- Informa UK Limited, 2014.
-
Abstract
- The complete mitochondrial DNA genome of Ptychobarbus kaznakovi was sequenced and characterized. The genome is 16,842 bp in length. Similar with most teleosts, it has two ribosomal RNA (rRNA) genes, 13 protein-coding genes, 22 transfer RNA (tRNA) genes, and one displacement loop (D-loop) region. Conserved sequence blocks, including ETAS, CSB-B, D, E, F, and CSB1-3, were identified in the D-loop, which is similar to other species in Cypriniformes. Nevertheless, a 55 bp tandem repeat array was also identified at 3′ end of the D-loop, which is the first finding in Schizothoracinae. Phylogenetic analysis showed that the species of Ptychobarbus (P. dipogon and P. kaznakovi) formed a monophyletic group and represented close relationship to the species without scales in Schizothoracinae.
- Subjects :
- Genetics
Mitochondrial DNA
Cyprinidae
Bayes Theorem
Biology
Ribosomal RNA
biology.organism_classification
DNA, Mitochondrial
Genome
Conserved sequence
D-loop
Cypriniformes
Genome, Mitochondrial
Transfer RNA
Animals
Nucleic Acid Conformation
Base Pairing
Molecular Biology
Gene
Conserved Sequence
Phylogeny
Repetitive Sequences, Nucleic Acid
Subjects
Details
- ISSN :
- 19401744 and 19401736
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA
- Accession number :
- edsair.doi.dedup.....21c3ebf09df3921f1f8512283ad860e8
- Full Text :
- https://doi.org/10.3109/19401736.2014.958727