Additional file 7 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

Additional file 7: Supplemental Figure 7. Taxonomic contributions to expressed enzymes in Purine metabolic pathway across different AGP treatments and diets with Day24 ceca samples. Shown here are the De novo biosynthesis and salvage pathways for purine, integrated with data generated from ceca collected at day 24. Each pie chart represents the taxonomic distributions of an enzyme (see key for color code). The size of pie charts indicates the average expression value (with log2 transform) of genes encoding that enzyme. Pie charts with red arrows refer to enzymes that are significantly up-regulated relative to the paired (+/- AGPs) sample. The abbreviations used here can be found in Supplemental Table 11.