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Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite

Authors :
Elena Kutumova
Florian Noguier
Kais Ghedira
Oliver Hofmann
ROMAN BRUNO
Dhafer Laouini
Hanene Attia
Ralf Herwig
Winston Hide
Ruslan Sharipov
Christoph Wierling
Fabien Pierrat
Beatrice REGNAULT
Pierre-André Cazenave
Slimane Ben miled
Nicki Tiffin
Imen RABHI
David Piquemal
Fatma Zahra Guerfali
Institut Pasteur de Tunis
Réseau International des Instituts Pasteur (RIIP)
Institute for Advanced Computer Studies Center for Bioinformatics and Computational Biology (CBCB)
Skuldtech. Cap Delta - ZAC Euromedecine II. 1682
rue de la Valsière
Génotypage des Eucaryotes (Plate-Forme)
Institut Pasteur [Paris]
The SysCo Consortium and this work were funded by the European Union under its 6th Framework Programme (LSHG-CT-2006-037231).
To Dr. A. Sassi and Pr. E. Ennaifer for blind determining of the percentage and the mean amastigote loads of infected cells.
Sysco consortium: Attia Hanène, Ben Miled Slimane, Benkahla Alia, Bruno Roman, Cazenave Pierre-André, Checkmeneva Elena, Daskalaki Andriani, Dellagi Koussay, Gabdoulline Razif, Ghedira Kais, Guerfali Fatma Z., Gustin Cindy, Herwig Ralf, Hide Winston, Hofmann Oliver, Hornischer Klaus, Kel Alexander, Kiselev Ilya, Kolpakov Fedor, Kondrakhin Yuriy, Kutumova Elena, Land Sigrid, Laouini Dhafer, Lemaire Julien, Liebich Ines, Manchon Laurent, Matys Volker, Michael Holger, Mkannez Ghada, Noguier Florian, Pierrat Fabien, Rasche Axel, Renard Patricia, Ryabova Anna, Sandoval Ruy Jauregui, Schacherer Frank, Sghaier Rabiaa Manel, Sharipov Ruslan, Stegmaier Philip, Tiffin Nicki, Tolstykh Nikita, Valeev Tagir, Voss Nico, Wierling Christoph, Yevshin Ivan.
Institut de Génétique Moléculaire de Montpellier (IGMM)
Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)
Institut Pasteur [Paris] (IP)
Source :
BMC Genomics, BMC Genomics, BioMed Central, 2013, 14 (1), pp.723. ⟨10.1186/1471-2164-14-723⟩, Rabhi, I, Rabhi, S, Ben-Othman, R, Aniba, M R, Trentin, B, Piquemal, D, Regnault, B, Guizani-Tabbane, L, Sysco Consortium & Renard, P 2013, ' Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite ', Genomics, vol. 14, pp. 723 . https://doi.org/10.1186/1471-2164-14-723, BMC Genomics, 2013, 14 (1), pp.723. ⟨10.1186/1471-2164-14-723⟩
Publication Year :
2013
Publisher :
Academic Press Inc., 2013.

Abstract

Background Leishmania are obligated intracellular pathogens that replicate almost exclusively in macrophages. The outcome of infection depends largely on parasite pathogenicity and virulence but also on the activation status and genetic background of macrophages. Animal models are essential for a better understanding of pathogenesis of different microbes including Leishmania. Results Here we compared the transcriptional signatures of resistant (C57BL/6) and susceptible (BALB/c) mouse bone marrow-derived macrophages in response to Leishmania major (L. major) promastigotes infection. Microarray results were first analyzed for significant pathways using the Kyoto Encylopedia of Genes and Genomes (KEGG) database. The analysis revealed that a large set of the shared genes is involved in the immune response and that difference in the expression level of some chemokines and chemokine receptors could partially explain differences in resistance. We next focused on up-regulated genes unique to either BALB/c or C57BL/6 derived macrophages and identified, using KEGG database, signal transduction pathways among the most relevant pathways unique to both susceptible and resistant derived macrophages. Indeed, genes unique to C57BL/6 BMdMs were associated with target of rapamycin (mTOR) signaling pathway while a range of genes unique to BALB/c BMdMs, belong to p53 signaling pathway. We next investigated whether, in a given mice strain derived macrophages, the different up-regulated unique genes could be coordinately regulated. Using GeneMapp Cytoscape, we showed that the induced genes unique to BALB/c or C57BL/6 BMdMs are interconnected. Finally, we examined whether the induced pathways unique to BALB/c derived macrophages interfere with the ones unique to C57BL/6 derived macrophages. Protein-protein interaction analysis using String database highlights the existence of a cross-talk between p53 and mTOR signaling pathways respectively specific to susceptible and resistant BMdMs. Conclusions Taken together our results suggest that strains specific pathogenesis may be due to a difference in the magnitude of the same pathways and/or to differentially expressed pathways in the two mouse strains derived macrophages. We identify signal transduction pathways among the most relevant pathways modulated by L. major infection, unique to BALB/c and C57BL/6 BMdM and postulate that the interplay between these potentially interconnected pathways could direct the macrophage response toward a given phenotype.

Details

Language :
English
ISSN :
08887543 and 14712164
Volume :
14
Database :
OpenAIRE
Journal :
Genomics
Accession number :
edsair.doi.dedup.....21f824e358c14f25b303fefa3ed92053