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Assessing motor-related phenotypes of Caenorhabditis elegans with the wide field-of-view nematode tracking platform

Authors :
Quentin Peter
Tuomas P. J. Knowles
Michele Vendruscolo
Renée I. Seinstra
Christopher M. Dobson
Mandy Koopman
Ellen A. A. Nollen
Michele Perni
Molecular Neuroscience and Ageing Research (MOLAR)
Source :
Nature protocols, 15(6), 2071-2106. Nature Publishing Group
Publication Year :
2020
Publisher :
Springer Science and Business Media LLC, 2020.

Abstract

Caenorhabditis elegans is a valuable model organism in biomedical research that has led to major discoveries in the fields of neurodegeneration, cancer and aging. Because movement phenotypes are commonly used and represent strong indicators of C. elegans fitness, there is an increasing need to replace manual assessments of worm motility with automated measurements to increase throughput and minimize observer biases. Here, we provide a protocol for the implementation of the improved wide field-of-view nematode tracking platform (WF-NTP), which enables the simultaneous analysis of hundreds of worms with respect to multiple behavioral parameters. The protocol takes only a few hours to complete, excluding the time spent culturing C. elegans, and includes (i) experimental design and preparation of samples, (ii) data recording, (iii) software management with appropriate parameter choices and (iv) post-experimental data analysis. We compare the WF-NTP with other existing worm trackers, including those having high spatial resolution. The main benefits of WF-NTP relate to the high number of worms that can be assessed at the same time on a whole-plate basis and the number of phenotypes that can be screened for simultaneously.

Details

ISSN :
17502799 and 17542189
Volume :
15
Database :
OpenAIRE
Journal :
Nature Protocols
Accession number :
edsair.doi.dedup.....242eaab4e98eedd497e4e2733874a25f
Full Text :
https://doi.org/10.1038/s41596-020-0321-9