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Rapid fully-automated assay for routine molecular diagnosis of BRAF mutations for personalized therapy of low grade gliomas

Authors :
François Doz
Marie Rouyer
Agnès Leroux
Guillaume Gauchotte
Jean-Louis Merlin
Pascal Chastagner
Pascale Varlet
Marie-Sophie Merlin
Pauline Gilson
Centre de Recherche en Automatique de Nancy (CRAN)
Centre National de la Recherche Scientifique (CNRS)-Université de Lorraine (UL)
Institut de Cancérologie de Lorraine - Alexis Vautrin [Nancy] (UNICANCER/ICL)
UNICANCER
Service d'Oncologie Pédiatrique [CHRU Nancy]
Centre Hospitalier Régional Universitaire de Nancy (CHRU Nancy)
Institut Curie [Paris]
Centre Hospitalier Sainte Anne [Paris]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Nutrition-Génétique et Exposition aux Risques Environnementaux (NGERE)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lorraine (UL)
Source :
Pediatric Hematology-Oncology, Pediatric Hematology-Oncology, Taylor & Francis, 2020, 37 (1), pp.29-40. ⟨10.1080/08880018.2019.1679304⟩
Publication Year :
2020
Publisher :
HAL CCSD, 2020.

Abstract

International audience; Background: BRAF mutation analysis is important to personalize the management with low-grade gliomas (LGG) in children and adults, with therapeutic and prognostic impacts. In recurrent tumors, targeted therapies such as BRAF inhibitors had been reported to induce disease stabilization and significant radiographic responses. This highlights the potential interest of BRAF mutation to stratify patients for targeted therapy. Standard operating procedures (SOP) for BRAF V600E mutation detection can be time-consuming and consequently delay treatment choice in patients with acute deterioration. Here, we evaluated IdyllaTM fully automated PCR (FA-PCR) assay for the rapid determination of BRAF mutational status in children and adult LGG.Methods: Formalin-fixed and paraffin-embedded (FFPE) samples from three histological LGG subtypes (ganglioglioma, pleomorphic xantoastrocytoma, and dysembryoplastic neuroepithelial tumor) with previous SOP-characterized BRAF mutational status were re-analyzed using the FA-PCR. Overall concordance with the mutational status determined using SOP, as well as sensitivity and specificity of FA-PCR technique were assessed.Results: All 14 samples gave interpretable results with FA-PCR. Overall concordance of BRAF mutational status between FA-PCR and SOP was 100%. Sensitivity and specificity were 100%.Conclusion: This study confirms the reliability of FA-PCR for BRAF mutations analysis in children and adult LGG. Considering the short time to results enabled by FA-PCR, providing results in less than 90 minutes, this technique represents an interesting option for the molecular diagnosis of LGG and personalization of treatment.

Details

Language :
English
ISSN :
08880018 and 15210669
Database :
OpenAIRE
Journal :
Pediatric Hematology-Oncology, Pediatric Hematology-Oncology, Taylor & Francis, 2020, 37 (1), pp.29-40. ⟨10.1080/08880018.2019.1679304⟩
Accession number :
edsair.doi.dedup.....246dd39797df1a14e61bf03cc0c5f0fb
Full Text :
https://doi.org/10.1080/08880018.2019.1679304⟩