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A review of the deterministic and diffusion approximations for stochastic chemical reaction networks
- Source :
- Reaction Kinetics, Mechanisms and Catalysis
- Publication Year :
- 2018
- Publisher :
- Springer Science and Business Media LLC, 2018.
-
Abstract
- This work reviews deterministic and diffusion approximations of the stochastic chemical reaction networks and explains their applications. We discuss the added value the diffusion approximation provides for systems with different phenomena, such as a deficiency and a bistability. It is advocated that the diffusion approximation can be considered as an alternative theoretical approach to study the reaction networks rather than a simulation shortcut. We discuss two examples in which the diffusion approximation is able to catch qualitative properties of reaction networks that the deterministic model misses. We provide an explicit construction of the original process and the diffusion approximation such that the distance between their trajectories is controlled and demonstrate this construction for the examples. We also discuss the limitations and potential directions of the developments.
- Subjects :
- 0301 basic medicine
Work (thermodynamics)
Bistability
Computer science
Reaction networks
01 natural sciences
Chemical reaction
Catalysis
010305 fluids & plasmas
03 medical and health sciences
Stochastic differential equation
Diffusion approximation
Bistable systems
Deficiency
Hungarian construction
Stochastic differential equations
Physical and Theoretical Chemistry
0103 physical sciences
FOS: Mathematics
Statistical physics
Diffusion (business)
Probability (math.PR)
Process (computing)
Heavy traffic approximation
030104 developmental biology
Stochastic optimization
Mathematics - Probability
Subjects
Details
- ISSN :
- 18785204 and 18785190
- Volume :
- 123
- Database :
- OpenAIRE
- Journal :
- Reaction Kinetics, Mechanisms and Catalysis
- Accession number :
- edsair.doi.dedup.....28c19239d4b3ae5e3f9305b64ffd6518
- Full Text :
- https://doi.org/10.1007/s11144-018-1351-y