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The association of Toll-like receptor 4 gene polymorphisms with the development of emphysema in Japanese subjects: a case control study
- Source :
- BMC Research Notes, Vol 5, Iss 1, p 36 (2012), BMC Research Notes
- Publication Year :
- 2012
- Publisher :
- BMC, 2012.
-
Abstract
- Background The principal role of Toll-like receptor 4 (TLR4) is the induction of immune responses to lipopolysaccharides. Previously, mice deficient in the TLR4 gene exhibited up-regulation of the NADPH oxidase system in the lungs. This resulted in increased oxidant generation and elastolytic activity, which led to pulmonary emphysema. It was suggested that TLR4 might maintain constitutive lung integrity by modulating oxidant generation. We investigated whether single nucleotide polymorphisms (SNPs) in the TLR4 gene were associated with the emphysema phenotype in Japanese subjects with chronic obstructive pulmonary disease (COPD). Results Seven SNPs in the TLR4 gene (rs10759930, rs1927914, rs12377632, rs2149356, rs11536889, rs7037117, and rs7045953) were genotyped with allelic discrimination assays. The frequencies of SNPs were compared between 106 patients with the emphysema phenotype of COPD and 137 healthy smokers. We found that the positivity of the individuals with the major G allele of rs11536889 was significantly less in the emphysema group than the control group (p = 0.019). The frequencies of the minor C allele and the distribution of the CC genotype as well as the frequency of the major haplotype that carried the minor C allele of rs11536889 were all significantly higher in the emphysema group than the control group (p = 0.0083, 0.019, and 0.004, respectively). Furthermore, the strength of the association of the CC genotype with the emphysema phenotype was in an odds ratio of 2.60 with 95% confidence intervals from 1.17 to 5.78. However, these significances were not apparent after adjust for age and smoking history by logistic regression. No associations were observed between the rs11536889 and the low attenuation area score, the forced expiratory volume, and the carbon monoxide diffusion capacity in the emphysema group. Conclusions The minor C allele of the rs11536889 SNP in the TLR4 gene is likely associated with the risk of developing emphysema in the Japanese population.
- Subjects :
- Male
Genotype
lcsh:Medicine
Single-nucleotide polymorphism
Biology
Polymorphism, Single Nucleotide
Linkage Disequilibrium
General Biochemistry, Genetics and Molecular Biology
Pulmonary Disease, Chronic Obstructive
Asian People
Gene Frequency
Forced Expiratory Volume
Odds Ratio
medicine
Humans
Genetic Predisposition to Disease
Allele
lcsh:Science (General)
Allele frequency
lcsh:QH301-705.5
Alleles
Aged
Emphysema
Medicine(all)
COPD
Biochemistry, Genetics and Molecular Biology(all)
Haplotype
lcsh:R
Case-control study
General Medicine
Odds ratio
Middle Aged
medicine.disease
Up-Regulation
respiratory tract diseases
Toll-Like Receptor 4
Phenotype
Haplotypes
lcsh:Biology (General)
Case-Control Studies
Immunology
Female
Research Article
lcsh:Q1-390
Subjects
Details
- Language :
- English
- ISSN :
- 17560500
- Volume :
- 5
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- BMC Research Notes
- Accession number :
- edsair.doi.dedup.....296f3d7087a425e082b6afae07dec286