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Discovery of GLO1 New Related Genes and Pathways by RNA-Seq on A2E-Stressed Retinal Epithelial Cells Could Improve Knowledge on Retinitis Pigmentosa
- Source :
- Antioxidants, Volume 9, Issue 5, Antioxidants, Vol 9, Iss 416, p 416 (2020)
- Publication Year :
- 2020
- Publisher :
- Multidisciplinary Digital Publishing Institute, 2020.
-
Abstract
- Endogenous antioxidants protect cells from reactive oxygen species (ROS)-related deleterious effects, and an imbalance in the oxidant/antioxidant systems generates oxidative stress. Glyoxalase 1 (GLO1) is a ubiquitous cellular enzyme involved in detoxification of methylglyoxal (MG), a cytotoxic byproduct of glycolysis whose excess can produce oxidative stress. In retinitis pigmentosa, one of the most diffuse cause of blindness, oxidative damage leads to photoreceptor death. To clarify the role of GLO1 in retinitis pigmentosa onset and progression, we treated human retinal pigment epithelium cells by the oxidant agent A2E. Transcriptome profiles between treated and untreated cells were performed by RNA-Seq, considering two time points (3 and 6 h), after the basal one. The exposure to A2E highlighted significant expression differences and splicing events in 370 GLO1 first-neighbor genes, and 23 of them emerged from pathway clustered analysis as main candidates to be associated with retinitis pigmentosa. Such a hypothesis was corroborated by the involvement of previously analyzed genes in specific cellular activities related to oxidative stress, such as glyoxylate and dicarboxylate metabolism, glycolysis, axo-dendritic transport, lipoprotein activity and metabolism, SUMOylation and retrograde transport at the trans-Golgi network. Our findings could be the starting point to explore unclear molecular mechanisms involved in retinitis pigmentosa etiopathogenesis.
- Subjects :
- 0301 basic medicine
Physiology
Clinical Biochemistry
SUMO protein
GLO1
A2E
oxidative stress
RNA-Seq
retinitis pigmentosa
Biology
medicine.disease_cause
Biochemistry
03 medical and health sciences
chemistry.chemical_compound
0302 clinical medicine
Retinitis pigmentosa
medicine
Glycolysis
Molecular Biology
Gene
chemistry.chemical_classification
Reactive oxygen species
Retinal pigment epithelium
lcsh:RM1-950
Methylglyoxal
Cell Biology
medicine.disease
Cell biology
lcsh:Therapeutics. Pharmacology
030104 developmental biology
medicine.anatomical_structure
chemistry
030220 oncology & carcinogenesis
Oxidative stress
Subjects
Details
- Language :
- English
- ISSN :
- 20763921
- Database :
- OpenAIRE
- Journal :
- Antioxidants
- Accession number :
- edsair.doi.dedup.....29baa609e30cff3298d86a8d26fd160d
- Full Text :
- https://doi.org/10.3390/antiox9050416