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Twelve Novel Mutations in the SLC26A3 Gene in 17 Sporadic Cases of Congenital Chloride Diarrhea
- Source :
- Journal of Pediatric Gastroenterology & Nutrition. 65:26-30
- Publication Year :
- 2017
- Publisher :
- Ovid Technologies (Wolters Kluwer Health), 2017.
-
Abstract
- Objectives: We aimed to improve the knowledge of pathogenic mutations in sporadic cases of congenital chloride diarrhea (CCD) and emphasize the importance of functional studies to define the effect of novel mutations. Methods: All member 3 of solute carrier family 26 (SLC26A3) coding regions were sequenced in 17 sporadic patients with CCD. Moreover, the minigene system was used to analyze the effect of 2 novel splicing mutations. Results: We defined the SLC26A3 genotype of all 17 patients with CDD and identified 12 novel mutations. Using the minigene system, we confirmed the in silico prediction of a complete disruption of splicing pattern caused by 2 of these novel mutations: the c.971þ3_971þ4delAA and c.735þ4_c.735þ7delAGTA. Moreover, several prediction tools and a structure-function prediction defined the pathogenic role of 6 novel missense mutations. Conclusions: We confirm the molecular heterogeneity of sporadic CDD adding 12 novel mutations to the list of known pathogenic mutations. Moreover, we underline the importance, for laboratories that offer molecular diagnosis and genetic counseling, to perform fast functional analysis of novel mutations
- Subjects :
- Diarrhea
Genetic Markers
0301 basic medicine
Genotype
Genotyping Techniques
Congenital chloride diarrhea
In silico
SLC26A3
03 medical and health sciences
0302 clinical medicine
medicine
Humans
Missense mutation
Chloride-Bicarbonate Antiporters
Genetic Testing
Gene
Genetics
biology
Gastroenterology
medicine.disease
030104 developmental biology
Sulfate Transporters
Case-Control Studies
Mutation
chloride losing diarrhea
diarrhea anion exchanger
genotype
member 3 of solute carrier family 26
mutations
splicing effect
Metabolism, Inborn Errors
Pediatrics, Perinatology and Child Health
RNA splicing
biology.protein
Gastroenterology, chloride losing diarrhea, diarrhea anion exchanger, mutations, SLC26A3, splicing effect
030211 gastroenterology & hepatology
Minigene
Subjects
Details
- ISSN :
- 15364801 and 02772116
- Volume :
- 65
- Database :
- OpenAIRE
- Journal :
- Journal of Pediatric Gastroenterology & Nutrition
- Accession number :
- edsair.doi.dedup.....2bea40e32b5d27c56c251a6a505656c3
- Full Text :
- https://doi.org/10.1097/mpg.0000000000001418