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Draft genome sequence of Enterococcus faecium SP15, a potential probiotic strain isolated from spring water
- Source :
- BMC Research Notes, Vol 12, Iss 1, Pp 1-3 (2019), BMC Research Notes
- Publication Year :
- 2019
- Publisher :
- BMC, 2019.
-
Abstract
- Objectives Enterococci are Gram-positive lactic acid bacteria and common inhabitants of the gastrointestinal tract of mammals, including humans. They are also widely distributed in diverse environments such as soil, water, vegetables and food. Enterococcus faecium is able to produce antimicrobial compounds (enterocins) and thus can act as a probiotic. E. faecium SP15 is a newly identified enterocin-producing strain from spring water that has been subjected to genome sequence analysis to provide understanding of its antimicrobial and probiotic properties. Data description The draft genome of E. faecium SP15 comprises of 2,783,033 bp with a G+C content of 38.08%. Five genetic loci predicted to specify enterocin production were identified, but no virulence factors could be detected and only two potential antibiotic resistance genes were noted.
- Subjects :
- 0301 basic medicine
Enterocin
Enterococcus faecium
Virulence
lcsh:Medicine
Fresh Water
Biology
Data Note
Probiotic
Genome
General Biochemistry, Genetics and Molecular Biology
law.invention
Microbiology
03 medical and health sciences
0302 clinical medicine
Rivers
law
Spring water
030212 general & internal medicine
Draft genome assembly
lcsh:Science (General)
lcsh:QH301-705.5
Whole genome sequencing
Strain (chemistry)
Probiotics
lcsh:R
food and beverages
Sequence Analysis, DNA
General Medicine
biochemical phenomena, metabolism, and nutrition
Antimicrobial
biology.organism_classification
030104 developmental biology
lcsh:Biology (General)
Genome, Bacterial
Bacteria
lcsh:Q1-390
Subjects
Details
- Language :
- English
- ISSN :
- 17560500
- Volume :
- 12
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- BMC Research Notes
- Accession number :
- edsair.doi.dedup.....2c51baeeb51659aa355aac7f0a444ca0
- Full Text :
- https://doi.org/10.1186/s13104-019-4136-0