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Insights from a qualitative analysis of a gene expression model with delays

Authors :
Marc R. Roussel
Hakkı Ulaş Ünal
Islam Boussaada
Silviu-Iulian Niculescu
Eskişehir Technical University
University of Lethbridge
Laboratoire des signaux et systèmes (L2S)
CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)
Dynamical Interconnected Systems in COmplex Environments (DISCO)
Inria Saclay - Ile de France
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Laboratoire des signaux et systèmes (L2S)
CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)
organisée par I. BOUSSAADA, G. MAZANTI, S.-I. NICULESCU, J. CHEN
Source :
MTNS 2021-24th International Symposium on Mathematical Theory of Networks and Systems, MTNS 2021-24th International Symposium on Mathematical Theory of Networks and Systems, organisée par I. BOUSSAADA, G. MAZANTI, S.-I. NICULESCU, J. CHEN, Aug 2021, Cambridge, United Kingdom, HAL, MTNS 2021-24th International Symposium on Mathematical Theory of Networks and Systems, organisée par I. BOUSSAADA, G. MAZANTI, S.-I. NICULESCU, J. CHEN, Aug 2021, Cambridge, United Kingdom. ⟨10.1016/j.ifacol.2021.06.174⟩
Publication Year :
2021
Publisher :
Elsevier BV, 2021.

Abstract

International audience; Delays appear in the dynamics of many systems due to non-vanishing reaction times of control systems. In biochemical systems, long sequences of repeated steps, especially in biopolymerization processes, can be modeled by delays. However, modelling systems with delays is often complicated by physical constraints, such as the requirement that solutions representing concentrations of chemical species remain positive. In this work, we consider a model for a detoxifying enzyme whose synthesis is controlled by its substrate. The model includes bindingsite clearance delays, caused by the time required for an RNA polymerase or ribosome to clear its binding site before another such machine can bind. The existence of a positive equilibrium and the positivity and boundedness of solutions of the corresponding delay-differential equations are proven. In addition, the stability of the model is studied using the "small-gain" theorem.

Details

ISSN :
24058963
Volume :
54
Database :
OpenAIRE
Journal :
IFAC-PapersOnLine
Accession number :
edsair.doi.dedup.....2c64f9913eee2c34230e01eab81a5d50
Full Text :
https://doi.org/10.1016/j.ifacol.2021.06.174