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Development and validation of an oxidative phosphorylation-related gene signature in lung adenocarcinoma

Authors :
Jingtao Zhang
Ruihao Zhou
Zilong Wu
Bentong Yu
Ling Ye
Pingliang Yang
Zihao Xu
Source :
Epigenomics. 12(15)
Publication Year :
2020

Abstract

Aim: To develop an oxidative phosphorylation (OXPHOS)-related gene signature of lung adenocarcinoma (LUAD). Materials & methods: We split The Cancer Genome Atlas LUAD cohort into a training set and a test set; we used the least absolute shrinkage and selection operator Cox method to structure the OXPHOS-related prognostic signature in the training set and verified in the test set and GSE30219 dataset. Meanwhile, the diagnostic model was constructed using the logistic Cox method. Results: The signature consisted of seven genes ( LDHA, CFTR, HSPD1, SNHG3, MAP1LC3C, COX6B2, and TWIST1). LUAD patients were divided into high- and low-risk groups, demonstrating good diagnostic and prognostic capabilities. Conclusion: We developed the first-ever OXPHOS-related signature with both prognostic predictive power and diagnostic efficacy.

Details

ISSN :
1750192X
Volume :
12
Issue :
15
Database :
OpenAIRE
Journal :
Epigenomics
Accession number :
edsair.doi.dedup.....2f5bb3657e27f0b6cfd5d05f5e31bf56