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Development and validation of an oxidative phosphorylation-related gene signature in lung adenocarcinoma
- Source :
- Epigenomics. 12(15)
- Publication Year :
- 2020
-
Abstract
- Aim: To develop an oxidative phosphorylation (OXPHOS)-related gene signature of lung adenocarcinoma (LUAD). Materials & methods: We split The Cancer Genome Atlas LUAD cohort into a training set and a test set; we used the least absolute shrinkage and selection operator Cox method to structure the OXPHOS-related prognostic signature in the training set and verified in the test set and GSE30219 dataset. Meanwhile, the diagnostic model was constructed using the logistic Cox method. Results: The signature consisted of seven genes ( LDHA, CFTR, HSPD1, SNHG3, MAP1LC3C, COX6B2, and TWIST1). LUAD patients were divided into high- and low-risk groups, demonstrating good diagnostic and prognostic capabilities. Conclusion: We developed the first-ever OXPHOS-related signature with both prognostic predictive power and diagnostic efficacy.
- Subjects :
- 0301 basic medicine
Oncology
Cancer Research
medicine.medical_specialty
Lung Neoplasms
Adenocarcinoma of Lung
Oxidative phosphorylation
Biology
Oxidative Phosphorylation
Cohort Studies
03 medical and health sciences
0302 clinical medicine
Internal medicine
Genetics
medicine
Humans
Related gene
Lung
Prognostic signature
Gene signature
medicine.disease
030104 developmental biology
medicine.anatomical_structure
030220 oncology & carcinogenesis
Test set
Adenocarcinoma
Selection operator
Subjects
Details
- ISSN :
- 1750192X
- Volume :
- 12
- Issue :
- 15
- Database :
- OpenAIRE
- Journal :
- Epigenomics
- Accession number :
- edsair.doi.dedup.....2f5bb3657e27f0b6cfd5d05f5e31bf56