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Global Root Traits (GRooT) Database

Authors :
Jens Kattge
Joseph M. Craine
Lawren Sack
Jasper van Ruijven
Koen Kramer
Franciska T. de Vries
Christopher J. Sweeney
Juli G. Pausas
Catherine Roumet
Josep Peñuelas
Peter M. van Bodegom
Marney E. Isaac
Ina C. Meier
Grégoire T. Freschet
Liesje Mommer
Christian Ammer
Helge Bruelheide
Peter B. Reich
Fons van der Plas
Johannes H. C. Cornelissen
Colleen M. Iversen
Fernando Valladares
Marina Semchenko
Peter Manning
Larry M. York
Vanessa Minden
Nathaly R. Guerrero-Ramírez
Bill Shipley
Thomas W. Kuyper
Vladimir G. Onipchenko
Isabelle Aubin
Oscar J. Valverde-Barrantes
Daniel C. Laughlin
Hendrik Poorter
Eric G. Lamb
Justin P. Wright
M. Luke McCormack
Stuart W. Smith
Bradley J. Butterfield
Jane A. Catford
Nadejda A. Soudzilovskaia
Patrick Weigelt
Rubén Milla
Christian König
Matthias C. Rillig
Alexandra Weigelt
Adam R. Martin
Leho Tedersoo
Joana Bergmann
German Centre for Integrative Biodiversity Research (iDiv)
Wageningen University and Research [Wageningen] (WUR)
Station d'écologie théorique et expérimentale (SETE)
Université Toulouse III - Paul Sabatier (UT3)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Observatoire Midi-Pyrénées (OMP)
Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)
Oak Ridge National Laboratory [Oak Ridge] (ORNL)
UT-Battelle, LLC
Pennsylvania State University (Penn State)
Penn State System
Max Planck Institute for Biogeochemistry (MPI-BGC)
Max-Planck-Gesellschaft
Forschungszentrum Jülich GmbH | Centre de recherche de Juliers
Helmholtz-Gemeinschaft = Helmholtz Association
Leipzig University
Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB)
Oklahoma State University [Stillwater]
Martin-Luther-University Halle-Wittenberg
University of Wyoming (UW)
Department of Soil Science of Temperate Ecosystems, Georg August University of Goettingen, Buesgenweg 2, 37077, Goettingen, Germany
Université Paul-Valéry Montpellier 3 - Faculté des Sciences humaines et des sciences de l'environnement ( UPVM UM3 UFR3)
Université Paul-Valéry - Montpellier 3 (UPVM)
University of Manchester [Manchester]
Florida International University [Miami] (FIU)
Canadian Forest Service - CFS (CANADA)
King‘s College London
Senckenberg Biodiversity and Climate Research Centre (SBiK-F)
Goethe-Universität Frankfurt am Main-Senckenberg – Leibniz Institution for Biodiversity and Earth System Research - Senckenberg Gesellschaft für Naturforschung
Leibniz Association-Leibniz Association
Department of Computer Science [University of Toronto] (DCS)
University of Toronto
Universidad Rey Juan Carlos [Madrid] (URJC)
University of Oldenburg
Centro de Investigaciones sobre Desertificacion (CIDE)
Consejo Superior de Investigaciones Científicas [Madrid] (CSIC)
Norwegian University of Science and Technology [Trondheim] (NTNU)
Norwegian University of Science and Technology (NTNU)
Leiden University
Northern Arizona University [Flagstaff]
Jonah Ventures, Boulder, CO, USA
Vrije Universiteit Amsterdam [Amsterdam] (VU)
University of Toronto [Scarborough, Canada]
Humboldt-Universität zu Berlin
University of Saskatchewan [Saskatoon] (U of S)
Lomonosov Moscow State University (MSU)
CSIC, Global Ecology Unit, CREAF-CEAB-UAB, Cerdanyola del Vallès, 08193 Catalonia, Spain
Hawkesbury Institute for the Environment [Richmond] (HIE)
Western Sydney University
University of California [Los Angeles] (UCLA)
University of California
Université de Sherbrooke (UdeS)
University of Tartu
Museo Nacional de Ciencias Naturales [Madrid] (MNCN)
Duke University [Durham]
Université de Toulouse (UT)-Université de Toulouse (UT)-Observatoire Midi-Pyrénées (OMP)
Institut de Recherche pour le Développement (IRD)-Université Toulouse III - Paul Sabatier (UT3)
Université de Toulouse (UT)-Université de Toulouse (UT)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Centre National de la Recherche Scientifique (CNRS)
Oklahoma State University [Stillwater] (OSU)
Georg-August-University = Georg-August-Universität Göttingen
Universiteit Leiden
University of Toronto at Scarborough
Humboldt University Of Berlin
University of California (UC)
Biology
Max Planck Institute for Biogeochemistry
German Centre for Integrative Biodiversity Research
Ecosystem and Landscape Dynamics (IBED, FNWI)
Systems Ecology
Station d'Ecologie Théorique et Expérimentale (SETE)
Centre National de la Recherche Scientifique (CNRS)-Fédération de Recherche Agrobiosciences, Interactions et Biodiversité (FR AIB)
Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3)
Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)
Centre d’Ecologie Fonctionnelle et Evolutive (CEFE)
Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro
Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
Source :
Global Ecology and Biogeography, Global Ecology and Biogeography, Wiley, 2020, 30, pp.25-37. ⟨10.1111/geb.13179⟩, Global Ecology and Biogeography, 2020, 30, pp.25-37. ⟨10.1111/geb.13179⟩, Global ecology and biogeography 30(1), 25-37 (2020). doi:10.1111/geb.13179, Global Ecology and Biogeography 30 (2021) 1, Semchenko, M 2020, ' Global root traits (GRooT) database ', Global Ecology and Biogeography . https://doi.org/10.1111/geb.13179, Guerrero-Ramirez, N R, Mommer, L, Freschet, G T, Iversen, C M, McCormack, M L, Kattge, J, Poorter, H, van Der Plas, F, Bergmann, J, Kuyper, T W, York, L M, Bruelheide, H, Laughlin, D C, Meier, I C, Roumet, C, Semchenko, M, Sweeney, C J, van Ruijven, J, Valverde-Barrantes, O J, Aubin, I, Catford, J A, Manning, P, Martin, A, Milla, R, Minden, V, Pausas, J G, Smith, S W, Soudzilovskaia, N A, Ammer, C, Butterfield, B, Craine, J, Cornelissen, J H C, de Vries, F T, Isaac, M E, Kramer, K, Koenig, C, Lamb, E G, Onipchenko, V G, Penuelas, J, Reich, P B, Rillig, M C, Sack, L, Shipley, B, Tedersoo, L, Valladares, F, van Bodegom, P, Weigelt, P, Wright, J P & Weigelt, A 2021, ' Global root traits (GRooT) database ', Global Ecology and Biogeography, vol. 30, no. 1, pp. 25-37 . https://doi.org/10.1111/geb.13179, Global Ecology and Biogeography, 30(1), 25-37, Digital.CSIC: Repositorio Institucional del CSIC, Consejo Superior de Investigaciones Científicas (CSIC), Global Ecology and Biogeography, 30(1), 25-37. John Wiley & Sons, Ltd (10.1111), Digital.CSIC. Repositorio Institucional del CSIC, instname, Global Ecology and Biogeography, 30(1), 25-37. Wiley-Blackwell, Global Ecology and Biogeography, 2021, 30 (1), pp.25-37. ⟨10.1111/geb.13179⟩
Publication Year :
2020
Publisher :
HAL CCSD, 2020.

Abstract

[Motivation]: Trait data are fundamental to the quantitative description of plant form and function. Although root traits capture key dimensions related to plant responses to changing environmental conditions and effects on ecosystem processes, they have rarely been included in large-scale comparative studies and global models. For instance, root traits remain absent from nearly all studies that define the global spectrum of plant form and function. Thus, to overcome conceptual and methodological roadblocks preventing a widespread integration of root trait data into large-scale analyses we created the Global Root Trait (GRooT) Database. GRooT provides ready to use data by combining the expertise of root ecologists with data mobilization and curation. Specifically, we (a) determined a set of core root traits relevant to the description of plant form and function based on an assessment by experts, (b) maximized species coverage through data standardization within and among traits, and (c) implemented data quality checks.<br />[Main types of variables contained]: GRooT contains 114,222 trait records on 38 continuous root traits.Spatial location and grain: Global coverage with data from arid, continental, polar, temperate and tropical biomes. Data on root traits were derived from experimental studies and field studies.<br />[Time period and grain]: Data were recorded between 1911 and 2019.<br />[Major taxa and level of measurement]: GRooT includes root trait data for which taxonomic information is available. Trait records vary in their taxonomic resolution, with subspecies or varieties being the highest and genera the lowest taxonomic resolution available. It contains information for 184 subspecies or varieties, 6,214 species, 1,967 genera and 254 families. Owing to variation in data sources, trait records in the database include both individual observations and mean values.<br />[Software format]: GRooT includes two csv files. A GitHub repository contains the csv files and a script in R to query the database.<br />The study has been supported by the TRY initiative on plant traits (http://www.try-db.org). The TRY initiative and database are hosted, developed and maintained at the Max Planck Institute for Biogeochemistry, Jena, Germany. TRY is currently supported by DIVERSITAS/Future Earth and the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig. Open access funding enabled and organized by Projekt DEAL.

Details

Language :
English
ISSN :
1466822X
Database :
OpenAIRE
Journal :
Global Ecology and Biogeography, Global Ecology and Biogeography, Wiley, 2020, 30, pp.25-37. ⟨10.1111/geb.13179⟩, Global Ecology and Biogeography, 2020, 30, pp.25-37. ⟨10.1111/geb.13179⟩, Global ecology and biogeography 30(1), 25-37 (2020). doi:10.1111/geb.13179, Global Ecology and Biogeography 30 (2021) 1, Semchenko, M 2020, ' Global root traits (GRooT) database ', Global Ecology and Biogeography . https://doi.org/10.1111/geb.13179, Guerrero-Ramirez, N R, Mommer, L, Freschet, G T, Iversen, C M, McCormack, M L, Kattge, J, Poorter, H, van Der Plas, F, Bergmann, J, Kuyper, T W, York, L M, Bruelheide, H, Laughlin, D C, Meier, I C, Roumet, C, Semchenko, M, Sweeney, C J, van Ruijven, J, Valverde-Barrantes, O J, Aubin, I, Catford, J A, Manning, P, Martin, A, Milla, R, Minden, V, Pausas, J G, Smith, S W, Soudzilovskaia, N A, Ammer, C, Butterfield, B, Craine, J, Cornelissen, J H C, de Vries, F T, Isaac, M E, Kramer, K, Koenig, C, Lamb, E G, Onipchenko, V G, Penuelas, J, Reich, P B, Rillig, M C, Sack, L, Shipley, B, Tedersoo, L, Valladares, F, van Bodegom, P, Weigelt, P, Wright, J P & Weigelt, A 2021, ' Global root traits (GRooT) database ', Global Ecology and Biogeography, vol. 30, no. 1, pp. 25-37 . https://doi.org/10.1111/geb.13179, Global Ecology and Biogeography, 30(1), 25-37, Digital.CSIC: Repositorio Institucional del CSIC, Consejo Superior de Investigaciones Científicas (CSIC), Global Ecology and Biogeography, 30(1), 25-37. John Wiley & Sons, Ltd (10.1111), Digital.CSIC. Repositorio Institucional del CSIC, instname, Global Ecology and Biogeography, 30(1), 25-37. Wiley-Blackwell, Global Ecology and Biogeography, 2021, 30 (1), pp.25-37. ⟨10.1111/geb.13179⟩
Accession number :
edsair.doi.dedup.....31626f734098822509f8633748c7687b
Full Text :
https://doi.org/10.1111/geb.13179⟩