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Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma

Authors :
Cian Monnin
Anthony D. Postle
S. J. Kumari A. Ubhayasekera
Matej Orešič
Tomas Cajka
Jacquelyn M. Weir
Candice Z. Ulmer
Stephen E. Somerville
Xueqing Zhao
Therese Koal
Renu Nandakumar
Senlin Zhou
Denis Reynaud
John A. Bowden
James E. Evans
Joost Brandsma
Rhishikesh Thakare
Jeremy P. Koelmel
Houli Jiang
Tuulia Hyötyläinen
Christoph H. Borchers
Oliver Fiehn
J. Will Thompson
Susanne Sales
Karen Lin
Christina M. Jones
Jun Han
Aveline H. Neo
Laila Abdullah
Charles N. Serhan
Mary R. Roth
Danielle J. McDougall
Alexander Triebl
Martin Trötzmüller
Yazen Alnouti
Serge Cremers
Michelle Cinel
Irwin J. Kurland
Kai Schuhmann
Craig E. Wheelock
Min Yuan
Romain A. Colas
Ruth Welti
Yingying Huang
Hiroaki Takeda
Timothy J. Garrett
Jon Rees
Takeshi Bamba
Grielof Koster
Michal A. Surma
Libin Yao
Natalie A. Mellett
Johan Kolmert
M. Arthur Moseley
Krishna Rao Maddipati
Harald Köfeler
John M. Asara
Dajana Vuckovic
Aaron M. Armando
Michael S. Gardner
Peter J. Meikle
Rebecca S. Pugh
Yoshihiro Izumi
Alexander Fauland
Antonio Checa
Jonas Bergquist
Amaury Cazenave-Gassiot
Parsram Ramrup
Zsuzsanna Kuklenyik
Alan Heckert
Hongfeng Jiang
Yunping Qiu
David A. Peake
Oswald Quehenberger
Markus R. Wenk
John R. Barr
Michael Leadley
Linda Ahonen
Barbara Rembiesa
Jiang Jiang
Martin Post
Kristaps Klavins
Susanne B. Breitkopf
Lisa St. John-Williams
Michal L. Schwartzman
Edward A. Dennis
Andrej Shevchenko
Katherine H. Gotlinger
Federico Torta
Christian Klose
Jason S. Pierce
Rainey E. Patterson
Reiko Kiyonami
Maureen Kachman
Source :
Journal of Lipid Research, Vol 58, Iss 12, Pp 2275-2288 (2017), Journal of lipid research, vol 58, iss 12
Publication Year :
2017

Abstract

As the lipidomics field continues to advance, self-evaluation within the community is critical. Here, we performed an interlaboratory comparison exercise for lipidomics using Standard Reference Material (SRM) 1950-Metabolites in Frozen Human Plasma, a commercially available reference material. The interlaboratory study comprised 31 diverse laboratories, with each laboratory using a different lipidomics workflow. A total of 1,527 unique lipids were measured across all laboratories and consensus location estimates and associated uncertainties were determined for 339 of these lipids measured at the sum composition level by five or more participating laboratories. These evaluated lipids detected in SRM 1950 serve as community-wide benchmarks for intra- and interlaboratory quality control and method validation. These analyses were performed using nonstandardized laboratory-independent workflows. The consensus locations were also compared with a previous examination of SRM 1950 by the LIPID MAPS consortium. While the central theme of the interlaboratory study was to provide values to help harmonize lipids, lipid mediators, and precursor measurements across the community, it was also initiated to stimulate a discussion regarding areas in need of improvement.

Details

Language :
English
ISSN :
00222275
Volume :
58
Issue :
12
Database :
OpenAIRE
Journal :
Journal of Lipid Research
Accession number :
edsair.doi.dedup.....31fa67210f8e4d4a130bf152aa7da0e3