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GWAS meta-analysis of intrahepatic cholestasis of pregnancy implicates multiple hepatic genes and regulatory elements

Authors :
Dixon, Peter H.
Levine, Adam P.
Cebola, Inês
Chan, Melanie M. Y.
Amin, Aliya S.
Aich, Anshul
Mozere, Monika
Maude, Hannah
Mitchell, Alice L.
Zhang, Jun
Adlard, Julian
Ahmed, Munaza
Aitman, Tim
Alachkar, Hana
Allsup, David
Almeida-King, Jeff
Ancliff, Philip
Antrobus, Richard
Armstrong, Ruth
Arno, Gavin
Ashford, Sofie
Astle, William
Attwood, Anthony
Babbs, Chris
Bakchoul, Tamam
Bariana, Tadbir
Barwell, Julian
Bennett, David
Bentley, David
Bierzynska, Agnieszka
Biss, Tina
Bleda, Marta
Bogaard, Harm
Bourne, Christian
Boyce, Sara
Bradley, John
Breen, Gerome
Brennan, Paul
Brewer, Carole
Brown, Matthew
Browning, Michael
Buchan, Rachel
Buckland, Matthew
Bueser, Teofila
Burns, Siobhan
Burren, Oliver
Calleja, Paul
Carr-White, Gerald
Carss, Keren
Casey, Ruth
Caulfield, Mark
Chambers, John
Chambers, Jennifer
Cheng, Floria
Chinnery, Patrick F.
Christian, Martin
Church, Colin
Brod, Naomi Clements
Coghlan, Gerry
Colby, Elizabeth
Cole, Trevor
Collins, Janine
Collins, Peter
Colombo, Camilla
Condliffe, Robin
Cook, Stuart
Cook, Terry
Cooper, Nichola
Corris, Paul
Crisp-Hihn, Abigail
Curry, Nicola
Danesino, Cesare
Daniels, Matthew
Daugherty, Louise
Davis, John
Deevi, Sri V. V.
Dent, Timothy
Dewhurst, Eleanor
Dixon, Peter
Downes, Kate
Drazyk, Anna
Drewe, Elizabeth
Dutt, Tina
Edgar, David
Edwards, Karen
Egner, William
Erber, Wendy
Erwood, Marie
Estiu, Maria C.
Evans, Gillian
Evans, Dafydd Gareth
Everington, Tamara
Eyries, Mélanie
Favier, Remi
Fletcher, Debra
Fox, James
Frary, Amy
French, Courtney
Freson, Kathleen
Frontini, Mattia
Gale, Daniel
Gall, Henning
Geoghegan, Claire
Gerighty, Terry
Ghio, Stefano
Ghofrani, Hossein-Ardeschir
Gibbs, Simon
Gilmour, Kimberley
Girerd, Barbara
Goddard, Sarah
Gomez, Keith
Gordins, Pavels
Gosal, David
Gräf, Stefan
Grassi, Luigi
Greene, Daniel
Greenhalgh, Lynn
Greinacher, Andreas
Gresele, Paolo
Griffiths, Philip
Grigoriadou, Sofia
Grocock, Russell
Grozeva, Detelina
Hackett, Scott
Hadinnapola, Charaka
Hague, William
Haimel, Matthias
Hall, Matthew
Hanson, Helen
Harkness, Kirsty
Harper, Andrew
Harris, Claire
Hart, Daniel
Hassan, Ahamad
Hayman, Grant
Henderson, Alex
Hoffmann, Jonathan
Horvath, Rita
Houweling, Arjan
Howard, Luke
Hu, Fengyuan
Hudson, Gavin
Hughes, Joseph
Huissoon, Aarnoud
Humbert, Marc
Humphray, Sean
Hunter, Sarah
Hurles, Matthew
Izatt, Louise
James, Roger
Johnson, Sally
Jolles, Stephen
Jolley, Jennifer
Jurkute, Neringa
Kasanicki, Mary
Kazkaz, Hanadi
Kazmi, Rashid
Kelleher, Peter
Kiely, David
Kingston, Nathalie
Klima, Robert
Kostadima, Myrto
Kovacs, Gabor
Koziell, Ania
Kreuzhuber, Roman
Kuijpers, Taco
Kumar, Ajith
Kumararatne, Dinakantha
Kuria, Manju
Laffa, Michael
Lalloo, Fiona
Lamber, Michele
Alle, Hana Lango
Lawrie, Allan
Layton, Mark
Lentaigne, Claire
Levine, Adam
Linger, Rachel
Longhurst, Hilary
Louka, Eleni
Ross, Robert MacKenzie
Madan, Bella
Maher, Eamonn
Maimaris, Jesmeen
Mangles, Sarah
Mapeta, Rutendo
Marchbank, Kevin
Marks, Stephen
Markus, Hugh S.
Marshall, Andrew
Martin, Jennifer
Mathias, Mary
Matthews, Emma
Maxwell, Heather
McAlinden, Paul
McCarthy, Mark
Meacham, Stuart
Mead, Adam
Megy, Karyn
Mehta, Sarju
Michaelides, Michel
Millar, Carolyn
Moledina, Shahin
Montani, David
Moor, Tony
Morrell, Nicholas
Muir, Keith
Mumford, Andrew
Newnham, Michael
O'Sullivan, Jennifer
Obaji, Samya
Okoli, Steven
Olschewski, Andrea
Olschewski, Horst
Ong, Kai Ren
Ormondroy, Elizabeth
Ouwehan, Willem
Papadi, Sofia
Park, Soo-Mi
Parry, David
Paterson, Joan
Peacock, Andrew
Peden, John
Peerlinck, Kathelijne
Penkett, Christopher
Pepke-Zaba, Joanna
Petersen, Romina
Pyle, Angela
Rankin, Stuart
Rao, Anupama
Raymond, F. Lucy
Rayner-Matthew, Paula
Rees, Christine
Rendon, Augusto
Renton, Tara
Rice, Andrew
Richardson, Sylvia
Richter, Alex
Roberts, Irene
Roughley, Catherine
Roy, Noemi
Sadeghi-Alavijeh, Omid
Saleem, Moin
Samani, Nilesh
Sanchis-Juan, Alba
Sargur, Ravishankar
Satchell, Simon
Savic, Sinisa
Scelsi, Laura
Schulman, Sol
Scully, Marie
Searle, Claire
Seeger, Werner
Sewell, Carrock
Seyres, Denis
Shapiro, Susie
Sharmardina, Olga
Shtoyerman, Rakefet
Sibson, Keith
Side, Lucy
Simeoni, Ilenia
Simpson, Michael
Sivapalaratnam, Suthesh
Skytte, Anne-Bine
Smith, Katherine
Smith, Kenneth G. C.
Snape, Katie
Soubrier, Florent
Staines, Simon
Staples, Emily
Stark, Hannah
Stephens, Jonathan
Stirrups, Kathleen
Stock, Sophie
Suntharalingam, Jay
Swietlik, Emilia
Tait, R. Campbell
Talks, Kate
Tan, Rhea
Thaventhiran, James
Themistocleous, Andreas
Thomas, Moira
Thomson, Kate
Thrasher, Adrian
Thys, Chantal
Tischkowitz, Marc
Titterton, Catherine
Toh, Cheng-Hock
Toshner, Mark
Traylor, Matthew
Treacy, Carmen
Trembath, Richard
Tuna, Salih
Turek, Wojciech
Turro, Ernest
Vale, Tom
Van Geet, Chris
Van Zuydam, Natalie
Vazquez-Lopez, Marta
von Ziegenweidt, Julie
Noordegraaf, Anton Vonk
Waisfisz, Quintin
Walker, Suellen
Ware, James
Watkins, Hugh
Watt, Christopher
Webster, Andrew
Wei, Wei
Welch, Steven
Wessels, Julie
Westbury, Sarah
Westwood, John-Paul
Wharton, John
Whitehorn, Deborah
Whitworth, James
Wilkins, Martin R.
Wong, Edwin
Wood, Nicholas
Wood, Yvette
Woods, Geoff
Woodward, Emma
Wort, Stephen
Worth, Austen
Yates, Katherine
Yong, Patrick
Young, Tim
Yu, Ping
Yu-Wai-Man, Patrick
Ambrose, J. C.
Arumugam, P.
Bevers, R.
Bleda, M.
Boardman-Pretty, F.
Boustred, C. R.
Brittain, H.
Brown, M. A.
Caulfield, M. J.
Chan, G. C.
Fowler, T.
Giess, A.
Hamblin, A.
Henderson, S.
Hubbard, T. J. P.
Jackson, R.
Jones, L. J.
Kasperaviciute, D.
Kayikci, M.
Kousathanas, A.
Lahnstein, L.
Leigh, S. E. A.
Leong, I. U. S.
Lopez, F. J.
Maleady-Crowe, F.
McEntagart, M.
Minneci, F.
Moutsianas, L.
Mueller, M.
Murugaesu, N.
Need, A. C.
O'Donovan, P.
Odhams, C. A.
Patch, C.
Perez-Gil, D.
Pereira, M. B.
Pullinger, J.
Rahim, T.
Rendon, A.
Rogers, T.
Savage, K.
Sawant, K.
Scott, R. H.
Siddiq, A.
Sieghart, A.
Smith, S. C.
Sosinsky, A.
Stuckey, A.
Tanguy, M.
Taylor Tavares, A. L.
Thomas, E. R. A.
Thompson, S. R.
Tucci, A.
Welland, M. J.
Williams, E.
Witkowska, K.
Wood, S. M.
Chambers, Jenny
Syngelaki, Argyro
Donnelly, Jennifer
Cooley, Sharon
Geary, Michael
Nicolaides, Kypros
Thorsell, Malin
Hague, William M.
Estiu, Maria Cecilia
Marschall, Hanns-Ulrich
Gale, Daniel P.
Williamson, Catherine
Pulmonary medicine
ACS - Pulmonary hypertension & thrombosis
Human genetics
ACS - Atherosclerosis & ischemic syndromes
Pediatrics
Foundation for the National Institutes of Health (FNIH)
The Academy of Medical Sciences
British Heart Foundation
Imperial College Healthcare NHS Trust- BRC Funding
Paediatric Infectious Diseases / Rheumatology / Immunology
ARD - Amsterdam Reproduction and Development
Source :
Nature communications, Nature Communications, 13(1):4840. Nature Publishing Group UK, Dixon, P H, Levine, A P, Cebola, I, Chan, M M Y, Amin, A S, Aich, A, Mozere, M, Maude, H, Mitchell, A L, Zhang, J, NIHR BioResource, Genomics England Research Consortium Collaborators, Chambers, J, Syngelaki, A, Donnelly, J, Cooley, S, Geary, M, Nicolaides, K H, Thorsel, M, Hague, W M, Estiu, M C, Marschall, H-U, Gale, D P & Williamson, C 2022, ' GWAS meta-analysis of intrahepatic cholestasis of pregnancy implicates multiple hepatic genes and regulatory elements ', Nature Communications, vol. 13, no. 1, 4840 . https://doi.org/10.1038/s41467-022-29931-z, Nature communications, 13(1):4840. Nature Publishing Group, NIHR BioResource & Genomics England Research Consortium Collaborators 2022, ' GWAS meta-analysis of intrahepatic cholestasis of pregnancy implicates multiple hepatic genes and regulatory elements ', Nature Communications, vol. 13, no. 1, 4840 . https://doi.org/10.1038/s41467-022-29931-z
Publication Year :
2022

Abstract

Intrahepatic cholestasis of pregnancy (ICP) is a pregnancy-specific liver disorder affecting 0.5-2% of pregnancies. The majority of cases present in the third trimester with pruritus, elevated serum bile acids and abnormal serum liver tests. ICP is associated with an increased risk of adverse outcomes, including spontaneous preterm birth and stillbirth. Whilst rare mutations affecting hepatobiliary transporters contribute to the aetiology of ICP, the role of common genetic variation in ICP has not been systematically characterised to date. Here, we perform genome-wide association studies (GWAS) and meta-analyses for ICP across three studies including 1138 cases and 153,642 controls. Eleven loci achieve genome-wide significance and have been further investigated and fine-mapped using functional genomics approaches. Our results pinpoint common sequence variation in liver-enriched genes and liver-specific cis-regulatory elements as contributing mechanisms to ICP susceptibility. ispartof: NATURE COMMUNICATIONS vol:13 issue:1 ispartof: location:England status: published

Details

Language :
English
ISSN :
20411723
Database :
OpenAIRE
Journal :
Nature communications, Nature Communications, 13(1):4840. Nature Publishing Group UK, Dixon, P H, Levine, A P, Cebola, I, Chan, M M Y, Amin, A S, Aich, A, Mozere, M, Maude, H, Mitchell, A L, Zhang, J, NIHR BioResource, Genomics England Research Consortium Collaborators, Chambers, J, Syngelaki, A, Donnelly, J, Cooley, S, Geary, M, Nicolaides, K H, Thorsel, M, Hague, W M, Estiu, M C, Marschall, H-U, Gale, D P & Williamson, C 2022, ' GWAS meta-analysis of intrahepatic cholestasis of pregnancy implicates multiple hepatic genes and regulatory elements ', Nature Communications, vol. 13, no. 1, 4840 . https://doi.org/10.1038/s41467-022-29931-z, Nature communications, 13(1):4840. Nature Publishing Group, NIHR BioResource & Genomics England Research Consortium Collaborators 2022, ' GWAS meta-analysis of intrahepatic cholestasis of pregnancy implicates multiple hepatic genes and regulatory elements ', Nature Communications, vol. 13, no. 1, 4840 . https://doi.org/10.1038/s41467-022-29931-z
Accession number :
edsair.doi.dedup.....32004aedd0a2cc7c0d8d5f85397d8762
Full Text :
https://doi.org/10.1038/s41467-022-29931-z