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The effects of plant nutritional strategy on soil microbial denitrification activity through rhizosphere primary metabolites

Authors :
Amélie A. M. Cantarel
Julien P. Guyonnet
Guillaume Meiffren
Serge Michalet
Gilles Comte
Feth el Zahar Haichar
Clément Labois
Florian Vautrin
Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM)
Centre National de la Recherche Scientifique (CNRS)-Ecole Nationale Vétérinaire de Lyon (ENVL)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Institut National de la Recherche Agronomique (INRA)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)
Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Ecole Nationale Vétérinaire de Lyon (ENVL)
Ecologie microbienne ( EM )
Centre National de la Recherche Scientifique ( CNRS ) -Ecole Nationale Vétérinaire de Lyon ( ENVL ) -Université Claude Bernard Lyon 1 ( UCBL )
Université de Lyon-Université de Lyon-Institut National de la Recherche Agronomique ( INRA ) -VetAgro Sup ( VAS )
Source :
FEMS Microbiology Ecology, FEMS Microbiology Ecology, Wiley-Blackwell, 2017, 93 (4), ⟨10.1093/femsec/fix022⟩, FEMS Microbiology Ecology, Wiley-Blackwell, 2017, 93 (4), 〈10.1093/femsec/fix022〉
Publication Year :
2017
Publisher :
HAL CCSD, 2017.

Abstract

The aim of this study was to determine (i) whether plant nutritional strategy affects the composition of primary metabolites exuded into the rhizosphere and (ii) the impact of exuded metabolites on denitrification activity in soil. We answered this question by analysing primary metabolite content extracted from the root-adhering soil (RAS) and the roots of three grasses representing different nutrient management strategies: conservative (Festuca paniculata), intermediate (Bromus erectus) and exploitative (Dactylis glomerata). We also investigated the impact of primary metabolites on soil microbial denitrification enzyme activity without carbon addition, comparing for each plant RAS and bulk soils. Our data show that plant nutritional strategy impacts on primary metabolite composition of root extracts or RAS. Further we show, for the first time, that RAS-extracted primary metabolites are probably better indicators to explain plant nutrient strategy than root-extracted ones. In addition, our results show that some primary metabolites present in the RAS were well correlated with soil microbial denitrification activity with positive relationships found between denitrification and the presence of some organic acids and negative ones with the presence of xylose. We demonstrated that the analysis of primary metabolites extracted from the RAS is probably more pertinent to evaluate the impact of plant on soil microbial community functioning.

Details

Language :
English
ISSN :
01686496 and 15746941
Database :
OpenAIRE
Journal :
FEMS Microbiology Ecology, FEMS Microbiology Ecology, Wiley-Blackwell, 2017, 93 (4), ⟨10.1093/femsec/fix022⟩, FEMS Microbiology Ecology, Wiley-Blackwell, 2017, 93 (4), 〈10.1093/femsec/fix022〉
Accession number :
edsair.doi.dedup.....340a77f0ef2cf8eb449cdda152d10631
Full Text :
https://doi.org/10.1093/femsec/fix022⟩