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Genotypic variability enhances the reproducibility of an ecological study
- Source :
- Nature Ecology & Evolution, Nature Ecology & Evolution, Nature, 2018, 2 (2), pp.279-287. ⟨10.1038/s41559-017-0434-x⟩, Nature Ecology & Evolution, 2018, 2 (2), pp.279-287. ⟨10.1038/s41559-017-0434-x⟩, Nature ecology & evolution On line 2 (2018): 279–+. doi:10.1038/s41559-017-0434-x, info:cnr-pdr/source/autori:Milcu, Alexandru; Puga-Freitas, Ruben; Ellison, Aaron M.; Blouin, Manuel; Scheu, Stefan; Freschet, Gregoire T.; Rose, Laura; Barot, Sebastien; Cesarz, Simone; Eisenhauer, Nico; Girin, Thomas; Assandri, Davide; Bonkowski, Michael; Buchmann, Nina; Butenschoen, Olaf; Devidal, Sebastien; Gleixner, Gerd; Gessler, Arthur; Gigon, Agnes; Greiner, Anna; Grignani, Carlo; Hansart, Amandine; Kayler, Zachary; Lange, Markus; Lata, Jean-Christophe; Le Gaillard, Jean-Francois; Lukac, Martin; Mannerheim, Neringa; Mueller, Marina E. H.; Pando, Anne; Rotter, Paula; Scherer-Lorenzen, Michael; Seyhun, Rahme; Urban-Mead, Katherine; Weigelt, Alexandra; Zavattaro, Laura; Roy, Jacques/titolo:Genotypic variability enhances the reproducibility of an ecological study/doi:10.1038%2Fs41559-017-0434-x/rivista:Nature ecology & evolution On line/anno:2018/pagina_da:279/pagina_a:+/intervallo_pagine:279–+/volume:2
- Publication Year :
- 2018
- Publisher :
- HAL CCSD, 2018.
-
Abstract
- International audience; Many scientific disciplines are currently experiencing a 'reproducibility crisis' because numerous scientific findings cannot be repeated consistently. A novel but controversial hypothesis postulates that stringent levels of environmental and biotic standardization in experimental studies reduce reproducibility by amplifying the impacts of laboratory-specific environmental factors not accounted for in study designs. A corollary to this hypothesis is that a deliberate introduction of controlled systematic variability (CSV) in experimental designs may lead to increased reproducibility. To test this hypothesis, we had 14 European laboratories run a simple microcosm experiment using grass (Brachypodium distachyon L.) monocultures and grass and legume (Medicago truncatula Gaertn.) mixtures. Each laboratory introduced environmental and genotypic CSV within and among replicated microcosms established in either growth chambers (with stringent control of environmental conditions) or glasshouses (with more variable environmental conditions). The introduction of genotypic CSV led to 18% lower among-laboratory variability in growth chambers, indicating increased reproducibility, but had no significant effect in glasshouses where reproducibility was generally lower. Environmental CSV had little effect on reproducibility. Although there are multiple causes for the 'reproducibility crisis', deliberately including genetic variability may be a simple solution for increasing the reproducibility of ecological studies performed under stringently controlled environmental conditions.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Grassland ecology
Microcosms
Genotype
Evolution
[SDE.MCG]Environmental Sciences/Global Changes
Ecosystem ecology
[SDV]Life Sciences [q-bio]
Biology
Environment
Transparency
010603 evolutionary biology
01 natural sciences
03 medical and health sciences
reproducibility crisis
Behavior and Systematics
Medicago truncatula
[SDV.BA.ZV]Life Sciences [q-bio]/Animal biology/Vertebrate Zoology
Genetic variability
Repeatability
Ecology, Evolution, Behavior and Systematics
Scientific disciplines
ComputingMilieux_MISCELLANEOUS
030304 developmental biology
0303 health sciences
Reproducibility
Diversity
Ecology
business.industry
Ecological study
Reproducibility of Results
food and beverages
Biodiversity
biology.organism_classification
Biotechnology
Europe
Animal-experiments
030104 developmental biology
Agronomy
Research Design
Brachypodium distachyon
[SDE.BE]Environmental Sciences/Biodiversity and Ecology
business
Microcosm
Brachypodium
Subjects
Details
- Language :
- English
- ISSN :
- 2397334X
- Database :
- OpenAIRE
- Journal :
- Nature Ecology & Evolution, Nature Ecology & Evolution, Nature, 2018, 2 (2), pp.279-287. ⟨10.1038/s41559-017-0434-x⟩, Nature Ecology & Evolution, 2018, 2 (2), pp.279-287. ⟨10.1038/s41559-017-0434-x⟩, Nature ecology & evolution On line 2 (2018): 279–+. doi:10.1038/s41559-017-0434-x, info:cnr-pdr/source/autori:Milcu, Alexandru; Puga-Freitas, Ruben; Ellison, Aaron M.; Blouin, Manuel; Scheu, Stefan; Freschet, Gregoire T.; Rose, Laura; Barot, Sebastien; Cesarz, Simone; Eisenhauer, Nico; Girin, Thomas; Assandri, Davide; Bonkowski, Michael; Buchmann, Nina; Butenschoen, Olaf; Devidal, Sebastien; Gleixner, Gerd; Gessler, Arthur; Gigon, Agnes; Greiner, Anna; Grignani, Carlo; Hansart, Amandine; Kayler, Zachary; Lange, Markus; Lata, Jean-Christophe; Le Gaillard, Jean-Francois; Lukac, Martin; Mannerheim, Neringa; Mueller, Marina E. H.; Pando, Anne; Rotter, Paula; Scherer-Lorenzen, Michael; Seyhun, Rahme; Urban-Mead, Katherine; Weigelt, Alexandra; Zavattaro, Laura; Roy, Jacques/titolo:Genotypic variability enhances the reproducibility of an ecological study/doi:10.1038%2Fs41559-017-0434-x/rivista:Nature ecology & evolution On line/anno:2018/pagina_da:279/pagina_a:+/intervallo_pagine:279–+/volume:2
- Accession number :
- edsair.doi.dedup.....354f42ebeb37e7312bf3b94deecd2ce9
- Full Text :
- https://doi.org/10.1038/s41559-017-0434-x⟩