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Lysobacter cavernae sp. nov., a novel bacterium isolated from a cave sample
- Source :
- Antonie van Leeuwenhoek. 109(7)
- Publication Year :
- 2016
-
Abstract
- A Gram-staining negative, aerobic, rod-shaped bacterium, designated YIM C01544(T), was isolated from a soil sample collected from Sigangli Cave, Yunnan province, South-West China. The strain was able to grow over a range of temperatures (4-30 °C), pH (6.0-10.0) and NaCl concentration (0-2 %, w/v). Comparative 16S rRNA gene sequence analysis revealed that strain YIM C01544(T) should be a member of the genus Lysobacter. The strain is closely related to Lysobacter niastensis GH41-7(T) (97.6 %), Lysobacter soli DCY21(T) (97.5 %), Lysobacter enzymogenes DSM 2043(T) (97.3 %), Lysobacter antibioticus DSM 2044(T) (97.1 %) and Lysobacter panacisoli CJ29(T) (97.1 %). The genomic DNA relatedness values (
- Subjects :
- 0301 basic medicine
DNA, Bacterial
China
030106 microbiology
Lysobacter
Sodium Chloride
Microbiology
DNA, Ribosomal
03 medical and health sciences
Nucleic acid thermodynamics
RNA, Ribosomal, 16S
Molecular Biology
Phospholipids
Phylogeny
Soil Microbiology
Base Composition
biology
Strain (chemistry)
Fatty Acids
Quinones
Nucleic Acid Hybridization
General Medicine
Sequence Analysis, DNA
biology.organism_classification
16S ribosomal RNA
genomic DNA
Caves
030104 developmental biology
Phenotype
Soil microbiology
Lysobacter cavernae
Bacteria
Subjects
Details
- ISSN :
- 15729699
- Volume :
- 109
- Issue :
- 7
- Database :
- OpenAIRE
- Journal :
- Antonie van Leeuwenhoek
- Accession number :
- edsair.doi.dedup.....35bd096b7faa010475af10838d4548ad