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Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 64:3655-3659
- Publication Year :
- 2014
- Publisher :
- Microbiology Society, 2014.
-
Abstract
- Two heterotrophic hyperthermophilic strains, ES1T and CL1T, were isolated from Paralvinella sp. polychaete worms collected from active hydrothermal vent chimneys in the north-eastern Pacific Ocean. Both were obligately anaerobic and produced H2S in the presence of elemental sulfur and H2. Complete genome sequences are available for both strains. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strains are more than 97 % similar to most other species of the genus Thermococcus . Therefore, overall genome relatedness index analyses were performed to establish that these strains are novel species. For each analysis, strain ES1T was determined to be most similar to Thermococcus barophilus MPT, while strain CL1T was determined to be most similar to Thermococcus sp. 4557. The average nucleotide identity scores for these strains were 84 % for strain ES1T and 81 % for strain CL1T, genome-to-genome direct comparison scores were 23 % for strain ES1T and 47 % for strain CL1T, and the species identification scores were 89 % for strain ES1T and 88 % for strain CL1T. For each analysis, strains ES1T and CL1T were below the species delineation cut-off. Therefore, based on their whole genome sequences, strains ES1T and CL1T are suggested to represent novel species of the genus Thermococcus for which the names Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. are proposed, respectively. The type strains are ES1T ( = DSM 27261T = KACC 17923T) and CL1T ( = DSM 27260T = KACC 17922T).
- Subjects :
- Pacific Ocean
Strain (chemistry)
Phylogenetic tree
Sequence analysis
Molecular Sequence Data
Polychaeta
Sequence Analysis, DNA
General Medicine
Biology
Ribosomal RNA
biology.organism_classification
16S ribosomal RNA
Microbiology
Thermococcus
Thermococcus barophilus
DNA, Archaeal
Hydrothermal Vents
Phylogenetics
RNA, Ribosomal, 16S
Animals
Phylogeny
Ecology, Evolution, Behavior and Systematics
Hydrothermal vent
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 64
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....362bd05455e012f93fc3bf077dc8dd9f
- Full Text :
- https://doi.org/10.1099/ijs.0.066100-0