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Sequential visibility-graph motifs
- Source :
- Physical Review E. 93
- Publication Year :
- 2016
- Publisher :
- American Physical Society (APS), 2016.
-
Abstract
- Visibility algorithms transform time series into graphs and encode dynamical information in their topology, paving the way for graph-theoretical time series analysis as well as building a bridge between nonlinear dynamics and network science. In this work we introduce and study the concept of sequential visibility-graph motifs, smaller substructures of n consecutive nodes that appear with characteristic frequencies. We develop a theory to compute in an exact way the motif profiles associated with general classes of deterministic and stochastic dynamics. We find that this simple property is indeed a highly informative and computationally efficient feature capable of distinguishing among different dynamics and robust against noise contamination. We finally confirm that it can be used in practice to perform unsupervised learning, by extracting motif profiles from experimental heart-rate series and being able, accordingly, to disentangle meditative from other relaxation states. Applications of this general theory include the automatic classification and description of physical, biological, and financial time series.
- Subjects :
- FOS: Computer and information sciences
Theoretical computer science
Visibility graph
FOS: Physical sciences
Probability and statistics
Network science
Nonlinear Sciences - Chaotic Dynamics
ENCODE
01 natural sciences
Machine Learning (cs.LG)
010305 fluids & plasmas
Computer Science - Learning
Nonlinear system
Physics - Data Analysis, Statistics and Probability
0103 physical sciences
Unsupervised learning
Motif (music)
Chaotic Dynamics (nlin.CD)
Time series
010306 general physics
Data Analysis, Statistics and Probability (physics.data-an)
Mathematics
Subjects
Details
- ISSN :
- 24700053 and 24700045
- Volume :
- 93
- Database :
- OpenAIRE
- Journal :
- Physical Review E
- Accession number :
- edsair.doi.dedup.....37ca4c860d4842df6dea0eb1bc1dc91a
- Full Text :
- https://doi.org/10.1103/physreve.93.042309