Back to Search Start Over

Convex-hull voting method on a large data set

Authors :
Radhakrishnan Nagarajan
Sally R. Ellingson
Chi Wang
Source :
BMC Bioinformatics
Publisher :
Springer Nature

Abstract

Background Genes work in concert as a system, not as independent entities, to mediate disease states. There has been considerable interest in understanding variations in molecular signatures between normal and disease states. The selective-voting convex-hull ensemble procedure accommodates molecular heterogeneity within and between groups and allows retrieval of sample-specific sets and investigation of variations in individual networks relevant to personalized medicine[1]. The work here describes using the convex-hull voting method on a large data set. Using parallelization techniques, we predict that we can execute the convex-hull voting algorithm on the University of Kentucky cluster (DLX) using a dataset much too large to run in a feasible time on a single machine.

Details

Language :
English
ISSN :
14712105
Volume :
16
Issue :
Suppl 15
Database :
OpenAIRE
Journal :
BMC Bioinformatics
Accession number :
edsair.doi.dedup.....3bd6bd358ab87739387e080398c55df7
Full Text :
https://doi.org/10.1186/1471-2105-16-s15-p2