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Characterization of microsatellite markers for the endangered Daphne rodriguezii (Thymelaeaceae) and related species

Authors :
Juan Carlos Illera
Anna Traveset
Carlos García-Verdugo
Agencia Estatal de Investigación (España)
Principado de Asturias
Govern de les Illes Balears
Ministerio de Ciencia, Innovación y Universidades (España)
Source :
Applications in Plant Sciences, Digital.CSIC. Repositorio Institucional del CSIC, instname, RUO. Repositorio Institucional de la Universidad de Oviedo, Applications in Plant Sciences, Vol 7, Iss 7, Pp n/a-n/a (2019)
Publication Year :
2019
Publisher :
John Wiley and Sons Inc., 2019.

Abstract

[Premise] The endangered shrub Daphne rodriguezii (Thymelaeaceae) is endemic to the Balearic island of Menorca, where fragmentation and severe population decline are ongoing threats to this taxon. We developed a set of microsatellite markers to analyze the fine-scale genetics of its few extant populations.<br />[Methods and Results] Fifteen microsatellite markers were obtained through Illumina high-throughput sequencing and tested in two populations. Twelve of these loci showed no evidence of null alleles and were highly polymorphic, with a mean number of 8.3 alleles per locus. Levels of observed and expected heterozygosity ranged from 0.100 to 0.952 and from 0.095 to 0.854, respectively. Seven to nine of these loci were successfully amplified in five other Daphne species.<br />[Conclusions] This set of markers provides a useful tool for investigating the factors driving fine-scale population structure in this threatened species, and it represents a novel genetic resource for other European Daphne species.<br />J.C.I. was funded by a GRUPIN research grant from the Regional Government of Asturias (Ref.: IDI/2018/000151), and C.G.‐V. was supported by a Vicenç Mut postdoctoral fellowship awarded by the Govern de les Illes Balears–Conselleria d'Innovació, Recerca i Turisme. The study was funded by the Ministerio de Economía, Industria y Competitividad (project Islet‐Foodwebs CGL2017‐88122‐P).

Details

Language :
English
ISSN :
21680450
Volume :
7
Issue :
7
Database :
OpenAIRE
Journal :
Applications in Plant Sciences
Accession number :
edsair.doi.dedup.....3ce4cda3ceae98c6dca717ab5814556a