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The complete chloroplast genome sequence of Vitis yeshanensis strain ‘SJTU004’
- Source :
- Mitochondrial DNA. Part B, Resources, article-version (VoR) Version of Record
- Publication Year :
- 2019
- Publisher :
- Taylor & Francis, 2019.
-
Abstract
- This study first released the complete chloroplast genome of Vitis yeshanensis. The circular genome was 161,188 bp in length, composed of a large single-copy region (LSC, 161,100–89,334 bp) and a small single-copy region (SSC, 115,689–134,745 bp), separated by two inverted repeat regions (IRA, 89,335–115,688 bp; IRB, 134,746–161,099 bp). The genome encoded 134 genes, containing 88 protein-coding genes (PCGs), 38 tRNA genes, and 8 rRNA genes. The phylogenetic tree showed a close relationship between V. yeshanensis and V. amurensis.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Whole genome sequencing
Genetics
Phylogenetic tree
Inverted repeat
Illumina sequencing
Ribosomal RNA
Biology
010603 evolutionary biology
01 natural sciences
Genome
Vitis yeshanensis
03 medical and health sciences
030104 developmental biology
Transfer RNA
phylogenetic tree
chloroplast genome
Molecular Biology
Gene
Illumina dye sequencing
Mitogenome Announcement
Research Article
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 4
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA. Part B, Resources
- Accession number :
- edsair.doi.dedup.....3d19ef6d6ea79e05075ebe1d57c9f985