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Herbaspirillum piri sp. nov., isolated from bark of a pear tree
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 68:3652-3656
- Publication Year :
- 2018
- Publisher :
- Microbiology Society, 2018.
-
Abstract
- A Gram-stain-negative, aerobic, motile bacterial strain, shQ-4T, was isolated from a pear tree in Henan Province, China. The strain grew at 10–41 °C, at pH 4.0–8.0 and in the presence of 1–3 % (w/v) NaCl. It shared highest 16S rRNA gene sequence similarity (96.66 %) with Herbaspirillum chlorophenolicum CPW301T. The phylogenetic tree based on 16S rRNA gene sequences showed that strain shQ-4T formed a distinct branch next to reference species in the genus Herbaspirillum . The profile of major polar lipids of strain shQ-4T contained phosphatidylethanolamine (PE), diphosphatidylglycerol (DPG), phosphatidylglycerol (PG) and an unidentified aminophospholipid (APL). The major respiratory quinone was Q-8. The major fatty acids of this strain were C16 : 0, summed feature 3 (C16 : 1ω6c/C16 : 1ω7c), C17 : 0 cyclo and C18 : 0. Strain shQ-4T is considered to represent a novel species of the genus Herbaspirillum , with the proposed name Herbaspirillum piri sp. nov. The type strain is shQ-4T (=CFCC 14641T=KCTC 52804T).
- Subjects :
- DNA, Bacterial
0301 basic medicine
China
Herbaspirillum
Ubiquinone
Microbiology
Pyrus
03 medical and health sciences
chemistry.chemical_compound
RNA, Ribosomal, 16S
Botany
Gene
Phospholipids
Phylogeny
Ecology, Evolution, Behavior and Systematics
Phosphatidylglycerol
Base Composition
Phylogenetic tree
biology
Strain (chemistry)
Fatty Acids
Sequence Analysis, DNA
General Medicine
biology.organism_classification
16S ribosomal RNA
Bacterial Typing Techniques
030104 developmental biology
chemistry
visual_art
Plant Bark
Nitrogen fixation
visual_art.visual_art_medium
lipids (amino acids, peptides, and proteins)
Bark
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 68
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....44b3383cd7962e94f0f6664ec205cbad
- Full Text :
- https://doi.org/10.1099/ijsem.0.003050