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Ultrafast ligand binding dynamics in the active site of native bacterial nitric oxide reductase

Authors :
Ross J. L. Hughes
Nicholas J. Watmough
Ursula Liebl
Marten H. Vos
Sarah J. Field
Sofia M. Kapetanaki
Source :
Biochimica et Biophysica Acta (BBA) - Bioenergetics. 1777(7-8):919-924
Publication Year :
2008
Publisher :
Elsevier BV, 2008.

Abstract

The active site of nitric oxide reductase from Paracoccus denitrificans contains heme and non-heme iron and is evolutionarily related to heme-copper oxidases. The CO and NO dynamics in the active site were investigated using ultrafast transient absorption spectroscopy. We find that, upon photodissociation from the active site heme, 20% of the CO rebinds in 170 ps, suggesting that not all the CO transiently binds to the non-heme iron. The remaining 80% does not rebind within 4 ns and likely migrates out of the active site without transient binding to the non-heme iron. Rebinding of NO to ferrous heme takes place in approximately 13 ps. Our results reveal that heme-ligand recombination in this enzyme is considerably faster than in heme-copper oxidases and are consistent with a more confined configuration of the active site.

Details

ISSN :
00052728
Volume :
1777
Issue :
7-8
Database :
OpenAIRE
Journal :
Biochimica et Biophysica Acta (BBA) - Bioenergetics
Accession number :
edsair.doi.dedup.....4865462338437de192b3b1624a6f2cbf
Full Text :
https://doi.org/10.1016/j.bbabio.2008.03.012