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Paenibacillus xerothermodurans sp. nov., an extremely dry heat resistant spore forming bacterium isolated from the soil of Cape Canaveral, Florida
- Source :
- International journal of systematic and evolutionary microbiology. 68(10)
- Publication Year :
- 2018
-
Abstract
- A Gram-stain-positive, motile, endospore-producing, facultative anaerobic bacterial strain, designated ATCC 27380T, was isolated from heat-stressed soil of Cape Canaveral, Florida, USA. Growth was observed at 20–42 °C (optimum, 37 °C), at pH 6.0–10.0 (optimum pH 7.0) and in the presence of 0.5–3 % NaCl (optimum 0.5 %). The cell wall contained meso-diaminopimelic acid as the diagnostic amino acid and the isoprenoid quinone was MK-7. The polar lipids present were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol and one unknown phospholipid. The main fatty acids were iso-C15 : 0 and anteiso-C15 : 0. Phylogenetic analysis based on 16S rRNA gene sequencing affiliated strain ATCC 27380T to the genus Paenibacillus , and showed the highest sequence similarity to Paenibacillus rigui JCM 16352T (97.0 %). The other closely related type strains exhibited 16S rRNA gene sequence similarity values below 95.9 %. The draft genome of ATCC 27380T had a size of 4,361,187 bases, with a G+C content of 51.0 %. The average nucleotide identity and in silico DNA–DNA hybridization values between strain ATCC 27380T and P. rigui JCM 16352T were 72.5% and 18.5 %, respectively, which were below the threshold suggested for species differentiation (96% and 70 %, respectively). The average amino acid identity between strain ATCC 27380T and P. rigui JCM 16352T was 68.72 %, which was above the suggested genus level demarcation of 65 %. Based on phenotypic, genotypic and chemotaxonomic data, strain ATCC 27380T represents a novel species in the genus Paenibacillus , for which the name Paenibacillus xerothermodurans sp. nov. (=DSM 520T=NRRL NRS-1629T=ATCC 27380T) is proposed.
- Subjects :
- 0301 basic medicine
DNA, Bacterial
Hot Temperature
Peptidoglycan
Biology
Diaminopimelic Acid
Microbiology
Cell wall
03 medical and health sciences
Paenibacillus
Genus
Cell Wall
RNA, Ribosomal, 16S
Ecology, Evolution, Behavior and Systematics
Phospholipids
Phylogeny
Soil Microbiology
chemistry.chemical_classification
Spores, Bacterial
Base Composition
Phylogenetic tree
Fatty Acids
Nucleic Acid Hybridization
Vitamin K 2
General Medicine
Sequence Analysis, DNA
16S ribosomal RNA
biology.organism_classification
Terpenoid
Amino acid
Bacterial Typing Techniques
030104 developmental biology
chemistry
Florida
Bacteria
Subjects
Details
- ISSN :
- 14665034
- Volume :
- 68
- Issue :
- 10
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology
- Accession number :
- edsair.doi.dedup.....4a18317266485e455a67ae50850e3ef0