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Spike sorting by stochastic simulation
- Source :
- IEEE Transactions on Neural Systems and Rehabilitation Engineering, IEEE Transactions on Neural Systems and Rehabilitation Engineering, Institute of Electrical and Electronics Engineers, 2011, 19 (3), pp.249-59. ⟨10.1109/TNSRE.2011.2112780⟩, Ge, D, Le Carpentier, E, Idier, J & Farina, D 2011, Spike sorting by stochastic simulation . in Proceedings Ninth Göttingen Meeting of the German Neuroscience Society and 33rd Göttingen Neurobiology Conference, 23-27 March 2011, Göttingen, Germany . Neurowissenschaftliche Gesellschaft, pp. No. T26-8C, Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 23/03/2011 . < http://www.nwg-goettingen.de/2011/upload/file/Proceedings_2011.pdf >, IEEE Transactions on Neural Systems and Rehabilitation Engineering, 2011, 19 (3), pp.249-59. ⟨10.1109/TNSRE.2011.2112780⟩
- Publication Year :
- 2011
- Publisher :
- HAL CCSD, 2011.
-
Abstract
- International audience; The decomposition of multiunit signals consists of the restoration of spike trains and action potentials in neural or muscular recordings. Because of the complexity of automatic decomposition, semiautomatic procedures are sometimes chosen. The main difficulty in automatic decomposition is the resolution of temporally overlapped potentials. In a previous study , we proposed a Bayesian model coupled with a maximum a posteriori (MAP) estimator for fully automatic decomposition of multiunit recordings and we showed applications to intramuscular EMG signals. In this study, we propose a more complex signal model that includes the variability in amplitude of each unit potential. Moreover, we propose the Markov Chain Monte Carlo (MCMC) simulation and a Bayesian minimum mean square error (MMSE) estimator by averaging on samples that converge in distribution to the joint posterior law. We prove the convergence property of this approach mathematically and we test the method representatively on intramuscular multiunit recordings. The results showed that its average accuracy in spike identification is greater than 90% for intramuscular signals with up to 8 concurrently active units. In addition to intramuscular signals, the method can be applied for spike sorting of other types of multiunit recordings.
- Subjects :
- Male
Computer science
02 engineering and technology
computer.software_genre
MESH: Signal Processing, Computer-Assisted
0302 clinical medicine
Evoked Potentials
MESH: Muscle, Skeletal
General Neuroscience
Rehabilitation
Sorting
Estimator
Signal Processing, Computer-Assisted
Markov Chains
MESH: Reproducibility of Results
MESH: Evoked Potentials
Spike sorting
intramuscular EMG decomposition
MESH: Young Adult
MESH: Stochastic Processes
symbols
Spike (software development)
[SDV.IB]Life Sciences [q-bio]/Bioengineering
Monte Carlo Method
Algorithm
Algorithms
Adult
MMSE estimation
MESH: Bayes Theorem
0206 medical engineering
Biomedical Engineering
MESH: Algorithms
MESH: Monte Carlo Method
Machine learning
Article
MESH: Electromyography
Young Adult
03 medical and health sciences
symbols.namesake
MESH: Computer Simulation
MESH: Markov Chains
Internal Medicine
Maximum a posteriori estimation
Humans
Computer Simulation
Muscle, Skeletal
[SDV.IB] Life Sciences [q-bio]/Bioengineering
Stochastic Processes
Models, Statistical
Minimum mean square error
MESH: Humans
Markov chain
Electromyography
business.industry
Reproducibility of Results
Bayes Theorem
Markov chain Monte Carlo
MESH: Adult
020601 biomedical engineering
MESH: Male
Bayesian model
Artificial intelligence
business
computer
030217 neurology & neurosurgery
MESH: Models, Statistical
Subjects
Details
- Language :
- English
- ISSN :
- 15344320 and 15580210
- Database :
- OpenAIRE
- Journal :
- IEEE Transactions on Neural Systems and Rehabilitation Engineering, IEEE Transactions on Neural Systems and Rehabilitation Engineering, Institute of Electrical and Electronics Engineers, 2011, 19 (3), pp.249-59. ⟨10.1109/TNSRE.2011.2112780⟩, Ge, D, Le Carpentier, E, Idier, J & Farina, D 2011, Spike sorting by stochastic simulation . in Proceedings Ninth Göttingen Meeting of the German Neuroscience Society and 33rd Göttingen Neurobiology Conference, 23-27 March 2011, Göttingen, Germany . Neurowissenschaftliche Gesellschaft, pp. No. T26-8C, Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 23/03/2011 . < http://www.nwg-goettingen.de/2011/upload/file/Proceedings_2011.pdf >, IEEE Transactions on Neural Systems and Rehabilitation Engineering, 2011, 19 (3), pp.249-59. ⟨10.1109/TNSRE.2011.2112780⟩
- Accession number :
- edsair.doi.dedup.....4a5342d6de94bfe64066b6283eb0e3a1
- Full Text :
- https://doi.org/10.1109/TNSRE.2011.2112780⟩