Additional file 1 of NEMoE: a nutrition aware regularized mixture of experts model to identify heterogeneous diet-microbiome-host health interactions

Additional file 1: Supplementary notes. Supplementary Fig. 1. Illustration of NEMoE and two-stage model. Supplementary Fig. 2. Graphical model representation of NEMoE. Supplementary Fig. 3. Nutrition classes determined by k-means do not show an informative relationship between microbiome and PD. Supplementary Fig 4. Simulation results of NEMoE and other methods under different settings. Supplementary Fig 5. External validation of consensus taxa Faecalibacterium and Blautia. Supplementary Fig 6. Prediction performance of different types of input for NEMoE. Supplementary Fig 7. ROC curves for different standardization methods of microbiome composition data analysis.