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Β-defensin in Nile tilapia (Oreochromis niloticus): Sequence, tissue expression, and anti-bacterial activity of synthetic peptides
- Source :
- Gene. 566(1)
- Publication Year :
- 2015
-
Abstract
- Beta-defensins (β-defensins) are small cationic amphiphilic peptides that are widely distributed in plants, insects, and vertebrates, and are important for their antimicrobial properties. In this study, the β-defensin (Onβ-defensin) gene of the Nile tilapia (Oreochromis niloticus) was cloned from spleen tissue. Onβ-defensin has a genomic DNA sequence of 674 bp and produces a cDNA of 454 bp. Sequence alignments showed that Onβ-defensin contains three exons and two introns. Sequence analysis of the cDNA identified an open reading frame of 201 bp, encoding 66 amino acids. Bioinformatic analysis showed that Onβ-defensin encodes a cytoplasmic protein molecule containing a signal peptide. The deduced amino acid sequence of this peptide contains six conserved cysteine residues and two conserved glycine residues, and shows 81.82% and 78.33% sequence similarities with β-defensin-1 of fugu (Takifugu rubripes) and rainbow trout (Oncorhynchus mykiss), respectively. Real-time quantitative PCR showed that the level of Onβ-defensin expression was highest in the skin (307.1-fold), followed by the spleen (77.3-fold), kidney (17.8-fold), and muscle (16.5-fold) compared to controls. By contrast, low levels of expression were found in the liver, heart, intestine, stomach, and gill (
- Subjects :
- Fish Proteins
Models, Molecular
beta-Defensins
Takifugu rubripes
Sequence analysis
Molecular Sequence Data
Sequence alignment
digestive system
Nile tilapia
Fish Diseases
Complementary DNA
Streptococcal Infections
Genetics
Animals
Amino Acid Sequence
Defensin
Peptide sequence
integumentary system
biology
Base Sequence
fungi
General Medicine
Cichlids
respiratory system
biology.organism_classification
Molecular biology
Beta defensin
Sequence Alignment
Subjects
Details
- ISSN :
- 18790038
- Volume :
- 566
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Gene
- Accession number :
- edsair.doi.dedup.....4c575adb79cb5ec267febd165baa9b58