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Acridine orange in a pumpkin-shaped macrocycle: Beyond solvent effects in the UV–visible spectra simulation of dyes
- Source :
- Journal of Molecular Structure: THEOCHEM, Journal of Molecular Structure: THEOCHEM, Elsevier, 2010, 954 (1-3), pp.45-51. ⟨10.1016/j.theochem.2010.01.031⟩
- Publication Year :
- 2010
- Publisher :
- HAL CCSD, 2010.
-
Abstract
- We present simulation of the UV–visible spectra of acridine orange, a widely used photosensitizer for in vivo studies due to its highly environment-dependent spectroscopic properties. This dye has been investigated both in its protonated and neutral forms, either isolated or embedded in a pumpkin-shaped macromolecular cycle (cucurbit-7-uril), using time-dependent density functional theory techniques. To model this macromolecular cycle, two strategies are taken into account, allowing decoupling of the geometric and electrostatic influences of the host on the guest molecules. Experimental data are well-reproduced when using an embedding electrostatic technique, suggesting that such a method holds great promise to investigate the environmental effects on dye absorption spectra at low computational cost.
- Subjects :
- Dye
010405 organic chemistry
Acridine orange
Protonation
Time-dependent density functional theory
010402 general chemistry
Condensed Matter Physics
Photochemistry
01 natural sciences
Biochemistry
0104 chemical sciences
chemistry.chemical_compound
chemistry
Density functional theory
Molecule
[CHIM]Chemical Sciences
Photosensitizer
Physical and Theoretical Chemistry
Solvent effects
ComputingMilieux_MISCELLANEOUS
Macromolecule
Subjects
Details
- Language :
- English
- ISSN :
- 01661280
- Database :
- OpenAIRE
- Journal :
- Journal of Molecular Structure: THEOCHEM, Journal of Molecular Structure: THEOCHEM, Elsevier, 2010, 954 (1-3), pp.45-51. ⟨10.1016/j.theochem.2010.01.031⟩
- Accession number :
- edsair.doi.dedup.....4c73a6c348632eee31fa8d46e7054773
- Full Text :
- https://doi.org/10.1016/j.theochem.2010.01.031⟩