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Minimum Information required for a DMET Experiment reporting

Authors :
Ron H.N. van Schaik
Clint Mizzi
Milan Macek
Panu Somervuo
Vita Dolzan
Mamana Mbiyavanga
Judit Kumuthini
Raj Ramesar
Jyotishman Pathak
Alessio Squassina
George P. Patrinos
Emile R. Chimusa
Kusha Kalideen
Clinical Chemistry
Pathology
Source :
Pharmacogenomics, 17(14), 1533-1545. Future Medicine Ltd.
Publication Year :
2016
Publisher :
Future Medicine Ltd., 2016.

Abstract

Aim: To provide pharmacogenomics reporting guidelines, the information and tools required for reporting to public omic databases. Material & methods: For effective DMET data interpretation, sharing, interoperability, reproducibility and reporting, we propose the Minimum Information required for a DMET Experiment (MIDE) reporting. Results: MIDE provides reporting guidelines and describes the information required for reporting, data storage and data sharing in the form of XML. Conclusion: The MIDE guidelines will benefit the scientific community with pharmacogenomics experiments, including reporting pharmacogenomics data from other technology platforms, with the tools that will ease and automate the generation of such reports using the standardized MIDE XML schema, facilitating the sharing, dissemination, reanalysis of datasets through accessible and transparent pharmacogenomics data reporting.

Details

ISSN :
17448042 and 14622416
Volume :
17
Issue :
14
Database :
OpenAIRE
Journal :
Pharmacogenomics
Accession number :
edsair.doi.dedup.....51768e77898dcc3a41136b89f54b8211